Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.38□□□□□ -2.03
COL6A2P12110 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.38□□□□□ -2.03
COL6A2P12110 RNU6-693P-201ENST00000516134 107 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 RNA5SP320-201ENST00000516263 124 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 RNVU1-2-201ENST00000516326 135 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 Y_RNA.692-201ENST00000516627 105 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 SNORD45.4-201ENST00000516629 73 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 Y_RNA.757-201ENST00000578934 114 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 MIR3121-201ENST00000579680 77 ntBASIC2.38□□□□□ -2.03
COL6A2P12110 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
COL6A2P12110 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
COL6A2P12110 U8.1-201ENST00000362843 134 ntBASIC2.37□□□□□ -2.03
COL6A2P12110 SNORD23.1-201ENST00000408212 104 ntBASIC2.37□□□□□ -2.03
COL6A2P12110 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.37□□□□□ -2.03
COL6A2P12110 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.37□□□□□ -2.03
COL6A2P12110 RNU6-1234P-201ENST00000516877 103 ntBASIC2.37□□□□□ -2.03
COL6A2P12110 RNU2-60P-201ENST00000517290 128 ntBASIC2.37□□□□□ -2.03
COL6A2P12110 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
COL6A2P12110 AC027279.3-201ENST00000625055 122 ntBASIC2.37□□□□□ -2.03
COL6A2P12110 MIR1291-201ENST00000627649 87 ntBASIC2.37□□□□□ -2.03
COL6A2P12110 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.37□□□□□ -2.03
COL6A2P12110 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
COL6A2P12110 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
COL6A2P12110 ZNF720P1-201ENST00000562403 1939 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 MIRLET7C-201ENST00000362160 84 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 Y_RNA.52-201ENST00000362760 96 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 RNU6-268P-201ENST00000364174 107 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 Y_RNA.280-201ENST00000364765 112 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 SNORD18B-201ENST00000365659 72 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 MIR144-201ENST00000384886 86 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 MIR518F-201ENST00000384973 87 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 MIR802-201ENST00000390235 94 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 HMGN2P32-201ENST00000444648 269 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 RNU6-1333P-201ENST00000516162 93 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 Y_RNA.686-201ENST00000516548 134 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 MIR3129-201ENST00000581095 76 ntBASIC2.36□□□□□ -2.03
COL6A2P12110 RNU6-1290P-201ENST00000362957 109 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 RNU1-51P-201ENST00000365345 176 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 MIR520A-201ENST00000384862 85 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 SNORD77.3-201ENST00000391113 65 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 RNA5SP501-201ENST00000410990 112 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 Y_RNA.629-201ENST00000411368 105 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 AL158823.1-201ENST00000418441 478 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 STAG3L5P-204ENST00000443759 179 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 RNU6-659P-201ENST00000516454 104 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 RNU6-1270P-201ENST00000517128 108 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 SNORA31.25-201ENST00000517242 134 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 U1.36-201ENST00000620684 176 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL6A2P12110 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
COL6A2P12110 AL442644.1-201ENST00000454390 3105 ntBASIC2.35□□□□□ -2.03
COL6A2P12110 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL6A2P12110 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL6A2P12110 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL6A2P12110 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
COL6A2P12110 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
COL6A2P12110 RNU6-112P-201ENST00000363599 104 ntBASIC2.34□□□□□ -2.03
COL6A2P12110 Y_RNA.261-201ENST00000364631 102 ntBASIC2.34□□□□□ -2.03
COL6A2P12110 Y_RNA.410-201ENST00000383992 113 ntBASIC2.34□□□□□ -2.03
COL6A2P12110 Y_RNA.563-201ENST00000384707 108 ntBASIC2.34□□□□□ -2.03
COL6A2P12110 AL034345.1-201ENST00000407768 123 ntBASIC2.34□□□□□ -2.03
COL6A2P12110 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.34□□□□□ -2.03
COL6A2P12110 RN7SKP179-201ENST00000516126 217 ntBASIC2.34□□□□□ -2.03
COL6A2P12110 AC134878.1-201ENST00000619901 243 ntBASIC2.34□□□□□ -2.03
COL6A2P12110 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
COL6A2P12110 RNU6-296P-201ENST00000384608 107 ntBASIC2.33□□□□□ -2.04
COL6A2P12110 HSPE1P9-201ENST00000440046 311 ntBASIC2.33□□□□□ -2.04
COL6A2P12110 MTATP6P21-201ENST00000440681 189 ntBASIC2.33□□□□□ -2.04
COL6A2P12110 CYCTP-201ENST00000504253 315 ntBASIC2.33□□□□□ -2.04
COL6A2P12110 AC026436.1-201ENST00000510537 270 ntBASIC2.33□□□□□ -2.04
COL6A2P12110 AC090049.2-201ENST00000550377 109 ntBASIC2.33□□□□□ -2.04
COL6A2P12110 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.33□□□□□ -2.04
COL6A2P12110 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.33□□□□□ -2.04
COL6A2P12110 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
COL6A2P12110 RNU6-1031P-201ENST00000384773 107 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 MIR548O-201ENST00000408583 114 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 RNU6-735P-201ENST00000410612 107 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.32□□□□□ -2.04
COL6A2P12110 AF228730.3-201ENST00000436691 102 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 AL158147.1-201ENST00000443970 75 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 AC114811.1-201ENST00000507207 168 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 SCARNA16.3-201ENST00000516595 184 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 Y_RNA.690-201ENST00000516603 95 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 Y_RNA.712-201ENST00000517011 92 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 AC103810.6-201ENST00000606708 136 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 AP000553.5-201ENST00000641933 54 ntBASIC2.32□□□□□ -2.04
COL6A2P12110 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
COL6A2P12110 MIRLET7G-201ENST00000362280 84 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 RNU6-833P-201ENST00000363486 107 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 Y_RNA.273-201ENST00000364703 102 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 RNU6-424P-201ENST00000384367 105 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 Y_RNA.547-201ENST00000384654 119 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.31□□□□□ -2.04
COL6A2P12110 RNU6-237P-201ENST00000515985 71 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 RNA5SP236-201ENST00000516169 116 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 RNU6-830P-201ENST00000516353 107 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 RNA5SP24-201ENST00000516478 95 ntBASIC2.31□□□□□ -2.04
COL6A2P12110 RNU7-193P-201ENST00000516723 65 ntBASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms