Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AC133104.2-201ENST00000615272 193 ntBASIC0.35□□□□□ -2.35
CD28P10747 MIR4272-201ENST00000635924 64 ntBASIC0.35□□□□□ -2.35
CD28P10747 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.34□□□□□ -2.35
CD28P10747 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
CD28P10747 RNU6-1209P-201ENST00000363655 107 ntBASIC0.34□□□□□ -2.36
CD28P10747 RNU6-674P-201ENST00000363831 107 ntBASIC0.34□□□□□ -2.36
CD28P10747 RNU6-268P-201ENST00000364174 107 ntBASIC0.34□□□□□ -2.36
CD28P10747 Y_RNA.314-201ENST00000365114 102 ntBASIC0.34□□□□□ -2.36
CD28P10747 RNU6-1040P-201ENST00000383974 107 ntBASIC0.34□□□□□ -2.36
CD28P10747 SNORA50A-201ENST00000384225 134 ntBASIC0.34□□□□□ -2.36
CD28P10747 SNORD116-29-201ENST00000384516 83 ntBASIC0.34□□□□□ -2.36
CD28P10747 RNU6-994P-201ENST00000410507 111 ntBASIC0.34□□□□□ -2.36
CD28P10747 AL358176.2-201ENST00000425769 204 ntBASIC0.34□□□□□ -2.36
CD28P10747 RNU6-559P-201ENST00000516151 98 ntBASIC0.34□□□□□ -2.36
CD28P10747 AC006441.5-201ENST00000612680 209 ntBASIC0.34□□□□□ -2.36
CD28P10747 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
CD28P10747 U8.7-201ENST00000364940 136 ntBASIC0.33□□□□□ -2.36
CD28P10747 RNU6-396P-201ENST00000365369 105 ntBASIC0.33□□□□□ -2.36
CD28P10747 SNORA2B-201ENST00000384583 137 ntBASIC0.33□□□□□ -2.36
CD28P10747 RNU6-1237P-201ENST00000384777 107 ntBASIC0.33□□□□□ -2.36
CD28P10747 U8.17-201ENST00000391292 132 ntBASIC0.33□□□□□ -2.36
CD28P10747 RNU6ATAC25P-201ENST00000408798 117 ntBASIC0.33□□□□□ -2.36
CD28P10747 RNU7-152P-201ENST00000458982 64 ntBASIC0.33□□□□□ -2.36
CD28P10747 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.33□□□□□ -2.36
CD28P10747 RNU4-57P-201ENST00000515980 135 ntBASIC0.33□□□□□ -2.36
CD28P10747 RNU6-277P-201ENST00000516272 106 ntBASIC0.33□□□□□ -2.36
CD28P10747 RNU6-699P-201ENST00000517081 110 ntBASIC0.33□□□□□ -2.36
CD28P10747 AC093027.1-201ENST00000546698 429 ntBASIC0.33□□□□□ -2.36
CD28P10747 AC011195.1-201ENST00000578177 177 ntBASIC0.33□□□□□ -2.36
CD28P10747 DEFB117-201ENST00000602356 141 ntBASIC0.33□□□□□ -2.36
CD28P10747 JPX_2.1-201ENST00000614161 69 ntBASIC0.33□□□□□ -2.36
CD28P10747 U6atac.1-201ENST00000616025 117 ntBASIC0.33□□□□□ -2.36
CD28P10747 MIR548AY-201ENST00000617669 107 ntBASIC0.33□□□□□ -2.36
CD28P10747 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.33□□□□□ -2.36
CD28P10747 MIR924-201ENST00000638017 53 ntBASIC0.33□□□□□ -2.36
CD28P10747 MIR1-1-201ENST00000362147 71 ntBASIC0.32□□□□□ -2.36
CD28P10747 Y_RNA.331-201ENST00000365267 102 ntBASIC0.32□□□□□ -2.36
CD28P10747 Y_RNA.376-201ENST00000365638 108 ntBASIC0.32□□□□□ -2.36
CD28P10747 VTRNA1-3-201ENST00000365645 89 ntBASIC0.32□□□□□ -2.36
CD28P10747 SNORD63-201ENST00000384262 68 ntBASIC0.32□□□□□ -2.36
CD28P10747 Y_RNA.463-201ENST00000384271 102 ntBASIC0.32□□□□□ -2.36
CD28P10747 MIR573-201ENST00000384964 99 ntBASIC0.32□□□□□ -2.36
CD28P10747 RNY4P36-201ENST00000391116 96 ntBASIC0.32□□□□□ -2.36
CD28P10747 RNU6-876P-201ENST00000391295 104 ntBASIC0.32□□□□□ -2.36
CD28P10747 AL603910.2-201ENST00000407268 136 ntBASIC0.32□□□□□ -2.36
CD28P10747 RNA5SP95-201ENST00000410319 137 ntBASIC0.32□□□□□ -2.36
CD28P10747 MTCO2P12-201ENST00000427426 682 ntBASIC0.32□□□□□ -2.36
CD28P10747 RPL23AP54-201ENST00000495129 419 ntBASIC0.32□□□□□ -2.36
CD28P10747 SNORA20.3-201ENST00000516880 132 ntBASIC0.32□□□□□ -2.36
CD28P10747 RNA5SP330-201ENST00000517096 96 ntBASIC0.32□□□□□ -2.36
CD28P10747 AC006600.1-201ENST00000572529 153 ntBASIC0.32□□□□□ -2.36
CD28P10747 MIR2681-201ENST00000581814 105 ntBASIC0.32□□□□□ -2.36
CD28P10747 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.32□□□□□ -2.36
CD28P10747 SNORD45.3-201ENST00000363836 72 ntBASIC0.31□□□□□ -2.36
CD28P10747 Y_RNA.242-201ENST00000364473 110 ntBASIC0.31□□□□□ -2.36
CD28P10747 Y_RNA.258-201ENST00000364613 105 ntBASIC0.31□□□□□ -2.36
CD28P10747 Y_RNA.387-201ENST00000383918 102 ntBASIC0.31□□□□□ -2.36
CD28P10747 SNORA51.10-201ENST00000384418 136 ntBASIC0.31□□□□□ -2.36
CD28P10747 MTCO2P33-201ENST00000402100 465 ntBASIC0.31□□□□□ -2.36
CD28P10747 RNU2-70P-201ENST00000410718 179 ntBASIC0.31□□□□□ -2.36
CD28P10747 AC024067.1-201ENST00000426199 223 ntBASIC0.31□□□□□ -2.36
CD28P10747 AC096644.2-201ENST00000429278 159 ntBASIC0.31□□□□□ -2.36
CD28P10747 SNORD11-201ENST00000459124 84 ntBASIC0.31□□□□□ -2.36
CD28P10747 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.31□□□□□ -2.36
CD28P10747 MIR548AO-201ENST00000579992 96 ntBASIC0.31□□□□□ -2.36
CD28P10747 AL121655.1-201ENST00000605811 308 ntBASIC0.31□□□□□ -2.36
CD28P10747 Y_RNA.772-201ENST00000606692 102 ntBASIC0.31□□□□□ -2.36
CD28P10747 MIR8087-201ENST00000612745 78 ntBASIC0.31□□□□□ -2.36
CD28P10747 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.31□□□□□ -2.36
CD28P10747 AC139792.2-201ENST00000624218 587 ntBASIC0.31□□□□□ -2.36
CD28P10747 RNU6-1115P-201ENST00000362490 106 ntBASIC0.3□□□□□ -2.36
CD28P10747 Y_RNA.115-201ENST00000363272 98 ntBASIC0.3□□□□□ -2.36
CD28P10747 RNU4-50P-201ENST00000364361 141 ntBASIC0.3□□□□□ -2.36
CD28P10747 SNORA1.2-201ENST00000365189 134 ntBASIC0.3□□□□□ -2.36
CD28P10747 SNORA24-201ENST00000384096 131 ntBASIC0.3□□□□□ -2.36
CD28P10747 Y_RNA.458-201ENST00000384240 102 ntBASIC0.3□□□□□ -2.36
CD28P10747 Y_RNA.505-201ENST00000384489 102 ntBASIC0.3□□□□□ -2.36
CD28P10747 Y_RNA.551-201ENST00000384661 102 ntBASIC0.3□□□□□ -2.36
CD28P10747 SNORD72-201ENST00000390994 80 ntBASIC0.3□□□□□ -2.36
CD28P10747 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.3□□□□□ -2.36
CD28P10747 RNU6-437P-201ENST00000459408 95 ntBASIC0.3□□□□□ -2.36
CD28P10747 SNORA40.14-201ENST00000516543 86 ntBASIC0.3□□□□□ -2.36
CD28P10747 Y_RNA.718-201ENST00000517110 102 ntBASIC0.3□□□□□ -2.36
CD28P10747 MIR4791-201ENST00000607666 84 ntBASIC0.3□□□□□ -2.36
CD28P10747 MTND1P7-201ENST00000632801 297 ntBASIC0.3□□□□□ -2.36
CD28P10747 AC068700.1-201ENST00000565862 3754 ntBASIC0.29□□□□□ -2.36
CD28P10747 RNU1-115P-201ENST00000365329 160 ntBASIC0.29□□□□□ -2.36
CD28P10747 RNU4-45P-201ENST00000365469 141 ntBASIC0.29□□□□□ -2.36
CD28P10747 RNU6-716P-201ENST00000365621 103 ntBASIC0.29□□□□□ -2.36
CD28P10747 Y_RNA.496-201ENST00000384444 101 ntBASIC0.29□□□□□ -2.36
CD28P10747 MIR570-201ENST00000384917 97 ntBASIC0.29□□□□□ -2.36
CD28P10747 MIR140-201ENST00000385282 100 ntBASIC0.29□□□□□ -2.36
CD28P10747 AC138393.2-201ENST00000414742 246 ntBASIC0.29□□□□□ -2.36
CD28P10747 MIR4300-201ENST00000581016 96 ntBASIC0.29□□□□□ -2.36
CD28P10747 MIR4264-201ENST00000583520 66 ntBASIC0.29□□□□□ -2.36
CD28P10747 AL080274.1-201ENST00000605565 220 ntBASIC0.29□□□□□ -2.36
CD28P10747 AL138825.1-201ENST00000618587 192 ntBASIC0.29□□□□□ -2.36
CD28P10747 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.28□□□□□ -2.36
CD28P10747 MIR330-201ENST00000362196 94 ntBASIC0.28□□□□□ -2.36
CD28P10747 Y_RNA.259-201ENST00000364619 101 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms