Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
RARAP10276 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
RARAP10276 MIR512-1-201ENST00000384913 84 ntBASIC2.99□□□□□ -1.93
RARAP10276 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.99□□□□□ -1.93
RARAP10276 RNA5SP341-201ENST00000516261 117 ntBASIC2.99□□□□□ -1.93
RARAP10276 MIR3945-201ENST00000581853 98 ntBASIC2.99□□□□□ -1.93
RARAP10276 AL162726.3-218ENST00000636401 95 ntBASIC2.99□□□□□ -1.93
RARAP10276 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.99□□□□□ -1.93
RARAP10276 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.99□□□□□ -1.93
RARAP10276 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.98□□□□□ -1.93
RARAP10276 MTATP8P2-201ENST00000435212 202 ntBASIC2.98□□□□□ -1.93
RARAP10276 STAG3L5P-204ENST00000443759 179 ntBASIC2.98□□□□□ -1.93
RARAP10276 AC114811.1-201ENST00000507207 168 ntBASIC2.98□□□□□ -1.93
RARAP10276 AC078899.2-201ENST00000595282 212 ntBASIC2.98□□□□□ -1.93
RARAP10276 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
RARAP10276 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.98□□□□□ -1.93
RARAP10276 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.98□□□□□ -1.93
RARAP10276 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RARAP10276 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.97□□□□□ -1.93
RARAP10276 RNU4-16P-201ENST00000364737 141 ntBASIC2.97□□□□□ -1.93
RARAP10276 SNORD38C-201ENST00000384381 69 ntBASIC2.97□□□□□ -1.93
RARAP10276 RNU6-851P-201ENST00000384565 107 ntBASIC2.97□□□□□ -1.93
RARAP10276 SNX2P2-201ENST00000424553 323 ntBASIC2.97□□□□□ -1.93
RARAP10276 AC022018.1-201ENST00000430685 241 ntBASIC2.97□□□□□ -1.93
RARAP10276 RNU6-1116P-201ENST00000517269 99 ntBASIC2.97□□□□□ -1.93
RARAP10276 AC107016.2-201ENST00000547968 190 ntBASIC2.97□□□□□ -1.93
RARAP10276 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.97□□□□□ -1.93
RARAP10276 MIR4769-201ENST00000584126 77 ntBASIC2.97□□□□□ -1.93
RARAP10276 AL442128.1-201ENST00000615151 90 ntBASIC2.97□□□□□ -1.93
RARAP10276 MIR8054-201ENST00000620877 86 ntBASIC2.97□□□□□ -1.93
RARAP10276 AC092435.3-201ENST00000565538 3654 ntBASIC2.97□□□□□ -1.93
RARAP10276 AC096644.4-201ENST00000563417 2912 ntBASIC2.96□□□□□ -1.93
RARAP10276 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RARAP10276 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.96□□□□□ -1.94
RARAP10276 MIRLET7C-201ENST00000362160 84 ntBASIC2.96□□□□□ -1.94
RARAP10276 Y_RNA.220-201ENST00000364244 109 ntBASIC2.96□□□□□ -1.94
RARAP10276 RNY1P7-201ENST00000384743 110 ntBASIC2.96□□□□□ -1.94
RARAP10276 SNORA11.4-201ENST00000408823 129 ntBASIC2.96□□□□□ -1.94
RARAP10276 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.96□□□□□ -1.94
RARAP10276 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.96□□□□□ -1.94
RARAP10276 RPL39P25-201ENST00000449384 154 ntBASIC2.96□□□□□ -1.94
RARAP10276 AL162274.2-201ENST00000614406 332 ntBASIC2.96□□□□□ -1.94
RARAP10276 MIR2052-201ENST00000636055 55 ntBASIC2.96□□□□□ -1.94
RARAP10276 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RARAP10276 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RARAP10276 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RARAP10276 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
RARAP10276 MIR342-201ENST00000362212 99 ntBASIC2.95□□□□□ -1.94
RARAP10276 SNORA27-201ENST00000384323 126 ntBASIC2.95□□□□□ -1.94
RARAP10276 RNU6-163P-201ENST00000384396 106 ntBASIC2.95□□□□□ -1.94
RARAP10276 AL445687.1-201ENST00000439946 251 ntBASIC2.95□□□□□ -1.94
RARAP10276 AC003982.1-202ENST00000469928 248 ntBASIC2.95□□□□□ -1.94
RARAP10276 MIR4325-201ENST00000583049 90 ntBASIC2.95□□□□□ -1.94
RARAP10276 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
RARAP10276 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RARAP10276 AL161431.1-201ENST00000618966 4205 ntBASIC2.95□□□□□ -1.94
RARAP10276 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
RARAP10276 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
RARAP10276 MIR302B-201ENST00000362188 73 ntBASIC2.94□□□□□ -1.94
RARAP10276 RNU6-816P-201ENST00000390914 107 ntBASIC2.94□□□□□ -1.94
RARAP10276 RNU6-1268P-201ENST00000391214 107 ntBASIC2.94□□□□□ -1.94
RARAP10276 RNU6-1239P-201ENST00000391310 107 ntBASIC2.94□□□□□ -1.94
RARAP10276 MIR1912-201ENST00000410389 80 ntBASIC2.94□□□□□ -1.94
RARAP10276 RN7SKP200-201ENST00000410564 320 ntBASIC2.94□□□□□ -1.94
RARAP10276 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.94□□□□□ -1.94
RARAP10276 SNORA31.4-201ENST00000516049 129 ntBASIC2.94□□□□□ -1.94
RARAP10276 RNU7-6P-201ENST00000516845 62 ntBASIC2.94□□□□□ -1.94
RARAP10276 SNORA28-201ENST00000606769 126 ntBASIC2.94□□□□□ -1.94
RARAP10276 MALAT1.1-201ENST00000618249 95 ntBASIC2.94□□□□□ -1.94
RARAP10276 AC027279.3-201ENST00000625055 122 ntBASIC2.94□□□□□ -1.94
RARAP10276 AL442644.1-201ENST00000454390 3105 ntBASIC2.94□□□□□ -1.94
RARAP10276 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RARAP10276 Y_RNA.93-201ENST00000363066 109 ntBASIC2.93□□□□□ -1.94
RARAP10276 SNORA25.6-201ENST00000364121 118 ntBASIC2.93□□□□□ -1.94
RARAP10276 Y_RNA.241-201ENST00000364470 117 ntBASIC2.93□□□□□ -1.94
RARAP10276 Y_RNA.466-201ENST00000384294 113 ntBASIC2.93□□□□□ -1.94
RARAP10276 RNA5SP144-201ENST00000410846 116 ntBASIC2.93□□□□□ -1.94
RARAP10276 EEF1A1P41-201ENST00000414667 207 ntBASIC2.93□□□□□ -1.94
RARAP10276 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.93□□□□□ -1.94
RARAP10276 AL035398.1-201ENST00000430869 322 ntBASIC2.93□□□□□ -1.94
RARAP10276 AL139132.1-201ENST00000431587 344 ntBASIC2.93□□□□□ -1.94
RARAP10276 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.93□□□□□ -1.94
RARAP10276 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.93□□□□□ -1.94
RARAP10276 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.93□□□□□ -1.94
RARAP10276 RNU6-998P-201ENST00000515894 101 ntBASIC2.93□□□□□ -1.94
RARAP10276 SNORA31.10-201ENST00000516482 106 ntBASIC2.93□□□□□ -1.94
RARAP10276 SNORA31.26-201ENST00000517250 137 ntBASIC2.93□□□□□ -1.94
RARAP10276 AC026271.5-201ENST00000577873 130 ntBASIC2.93□□□□□ -1.94
RARAP10276 AC005786.1-201ENST00000588553 154 ntBASIC2.93□□□□□ -1.94
RARAP10276 AC062037.1-201ENST00000605302 128 ntBASIC2.93□□□□□ -1.94
RARAP10276 AC006386.2-201ENST00000624491 75 ntBASIC2.93□□□□□ -1.94
RARAP10276 AC012005.1-201ENST00000624575 75 ntBASIC2.93□□□□□ -1.94
RARAP10276 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
RARAP10276 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
RARAP10276 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RARAP10276 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.92□□□□□ -1.94
RARAP10276 SNORD115-3-201ENST00000363100 82 ntBASIC2.92□□□□□ -1.94
RARAP10276 SNORA63D-201ENST00000364359 132 ntBASIC2.92□□□□□ -1.94
RARAP10276 COTL1P1-201ENST00000422309 375 ntBASIC2.92□□□□□ -1.94
RARAP10276 S100A11P2-201ENST00000467589 312 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 142.6 ms