Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 Y_RNA.813-201ENST00000364639 102 ntBASIC1□□□□□ -2.25
GGPS1O95749 Y_RNA.354-201ENST00000365448 111 ntBASIC1□□□□□ -2.25
GGPS1O95749 SNORD38C-201ENST00000384381 69 ntBASIC1□□□□□ -2.25
GGPS1O95749 Y_RNA.645-201ENST00000391229 102 ntBASIC1□□□□□ -2.25
GGPS1O95749 SNORA36B-201ENST00000410438 131 ntBASIC1□□□□□ -2.25
GGPS1O95749 RNU2-14P-201ENST00000411053 191 ntBASIC1□□□□□ -2.25
GGPS1O95749 Y_RNA.148-201ENST00000363557 117 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 RNU6-1048P-201ENST00000364054 107 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 SNRPGP14-201ENST00000435400 219 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 PDCD5P2-201ENST00000507570 312 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 RN7SKP164-201ENST00000516138 266 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 CYP3A137P-201ENST00000562436 69 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 AC008507.4-201ENST00000585464 127 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 AC005357.1-201ENST00000588399 301 ntBASIC0.99□□□□□ -2.25
GGPS1O95749 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.98□□□□□ -2.25
GGPS1O95749 SNORA25.3-201ENST00000363205 127 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 Y_RNA.136-201ENST00000363444 102 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 RNY1-201ENST00000364228 113 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 Y_RNA.418-201ENST00000384029 102 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 MIR802-201ENST00000390235 94 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 RNU6-823P-201ENST00000391042 103 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 MIR942-201ENST00000401111 86 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 MIR1185-1-201ENST00000408598 86 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 HSPE1P25-201ENST00000455484 251 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 RNU6-397P-201ENST00000516226 104 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 RNU6-191P-201ENST00000516295 94 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.98□□□□□ -2.25
GGPS1O95749 RAC1P9-201ENST00000604990 392 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 SEPT14P17-201ENST00000617978 177 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 AL160413.1-201ENST00000622780 310 ntBASIC0.98□□□□□ -2.25
GGPS1O95749 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.98□□□□□ -2.25
GGPS1O95749 Y_RNA.28-201ENST00000362554 111 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 RNU1-36P-201ENST00000365130 165 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 RNU6-102P-201ENST00000384485 104 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 SNORD115-46-201ENST00000390982 71 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 SNORA26.5-201ENST00000391215 123 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 RNU6-496P-201ENST00000516145 99 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 RNU6-830P-201ENST00000516353 107 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 Y_RNA.721-201ENST00000517207 102 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.97□□□□□ -2.25
GGPS1O95749 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 C8orf59P2-201ENST00000603441 271 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 AC104695.3-201ENST00000604052 296 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 FAM71BP1-201ENST00000604431 523 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
GGPS1O95749 RNU4-90P-201ENST00000362773 141 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 MIR1252-201ENST00000408861 65 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 SNORD11-201ENST00000459124 84 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 RNU6-1007P-201ENST00000516586 107 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 RNU6-897P-201ENST00000517135 105 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 RPL23AP91-201ENST00000569211 455 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 AC008133.2-201ENST00000624540 351 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 AC134026.1-201ENST00000623249 2239 ntBASIC0.96□□□□□ -2.26
GGPS1O95749 RNU6-268P-201ENST00000364174 107 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 RNU6-450P-201ENST00000364654 107 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 Y_RNA.330-201ENST00000365230 109 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 Y_RNA.460-201ENST00000384255 102 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 MIR1278-201ENST00000408753 81 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 RNU6-101P-201ENST00000410323 104 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 Y_RNA.602-201ENST00000410535 92 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 Y_RNA.631-201ENST00000459607 101 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.95□□□□□ -2.26
GGPS1O95749 RNU6-764P-201ENST00000516396 105 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 Pinc.1-201ENST00000616452 154 ntBASIC0.95□□□□□ -2.26
GGPS1O95749 RNU6-899P-201ENST00000363947 107 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 Y_RNA.242-201ENST00000364473 110 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 Y_RNA.569-201ENST00000384749 103 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
GGPS1O95749 SNORD28B-201ENST00000390993 75 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 FABP5P4-201ENST00000437203 171 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 RNU11-2P-201ENST00000516898 142 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 RNU6-988P-201ENST00000519081 107 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 MIR5000-201ENST00000577717 103 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 MIR548AR-201ENST00000582191 57 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 AC131055.1-201ENST00000584626 316 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 MIR4251-201ENST00000635819 61 ntBASIC0.94□□□□□ -2.26
GGPS1O95749 RNU6-1187P-201ENST00000364771 110 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 Y_RNA.389-201ENST00000383924 113 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 RNU6-474P-201ENST00000384243 107 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
GGPS1O95749 SNORD72-201ENST00000390994 80 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 Y_RNA.581-201ENST00000391017 97 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 MTCO2P33-201ENST00000402100 465 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 RPS3AP1-201ENST00000413190 320 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.93□□□□□ -2.26
GGPS1O95749 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.93□□□□□ -2.26
GGPS1O95749 RPL39P28-201ENST00000465655 155 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 RNA5SP255-201ENST00000516370 107 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.93□□□□□ -2.26
GGPS1O95749 AC108706.1-201ENST00000611053 297 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 AC006441.5-201ENST00000612680 209 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 MTND4P29-201ENST00000503122 1372 ntBASIC0.93□□□□□ -2.26
GGPS1O95749 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
GGPS1O95749 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
GGPS1O95749 Y_RNA.370-201ENST00000365589 108 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 Y_RNA.380-201ENST00000365663 111 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 RNU6-763P-201ENST00000390865 106 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 AL603910.2-201ENST00000407268 136 ntBASIC0.92□□□□□ -2.26
GGPS1O95749 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.92□□□□□ -2.26
GGPS1O95749 MTCO1P5-201ENST00000433573 344 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms