Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MIR8055-201ENST00000610739 97 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 AC134878.1-201ENST00000619901 243 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 SNORD115-2-201ENST00000362842 82 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 RNY4P27-201ENST00000363341 96 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 Y_RNA.270-201ENST00000364693 104 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 FCF1P9-201ENST00000412546 282 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 RNU6-1337P-201ENST00000516525 95 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 RNA5SP47-201ENST00000517230 109 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 MIR4676-201ENST00000583078 72 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 AP001506.1-201ENST00000615444 211 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 MTND1P7-201ENST00000632801 297 ntBASIC-0.65□□□□□ -2.51
ABCA1O95477 SNORD50B-201ENST00000364995 70 ntBASIC-0.66□□□□□ -2.51
ABCA1O95477 RNU6-157P-201ENST00000383957 107 ntBASIC-0.66□□□□□ -2.51
ABCA1O95477 RNU6-214P-201ENST00000384130 107 ntBASIC-0.66□□□□□ -2.51
ABCA1O95477 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.51
ABCA1O95477 AL354751.2-201ENST00000415471 210 ntBASIC-0.66□□□□□ -2.51
ABCA1O95477 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.66□□□□□ -2.51
ABCA1O95477 RNU6-830P-201ENST00000516353 107 ntBASIC-0.66□□□□□ -2.51
ABCA1O95477 AP000942.4-201ENST00000604811 241 ntBASIC-0.66□□□□□ -2.51
ABCA1O95477 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 RNU4-36P-201ENST00000364294 144 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 RNU6-660P-201ENST00000364566 109 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 RNY4P34-201ENST00000364779 95 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 RNY3P9-201ENST00000384727 106 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.66□□□□□ -2.52
ABCA1O95477 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC-0.66□□□□□ -2.52
ABCA1O95477 RNU2-13P-201ENST00000515909 113 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 RNU7-175P-201ENST00000515915 61 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 MIR4509-3-201ENST00000578671 94 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 MIR4509-2-201ENST00000583920 94 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 MIR4509-1-201ENST00000618224 94 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 AC099654.12-201ENST00000639868 649 ntBASIC-0.66□□□□□ -2.52
ABCA1O95477 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-509P-201ENST00000363519 107 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-324P-201ENST00000363957 106 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 Y_RNA.442-201ENST00000384131 102 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-767P-201ENST00000384132 107 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 SNORA75.4-201ENST00000391278 119 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 AL356010.1-201ENST00000456364 102 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU7-73P-201ENST00000458743 63 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-107P-201ENST00000516643 102 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-881P-201ENST00000516813 102 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 MTCO2P4-201ENST00000517968 247 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 AC134698.4-201ENST00000523451 826 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 AC127459.3-201ENST00000624328 466 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 SNORD116-9-201ENST00000384000 95 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 SNORD116-3-201ENST00000384287 95 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 SNORD116-8-201ENST00000384365 95 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 SNORD116-7-201ENST00000384404 95 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 SNORD116-5-201ENST00000384462 95 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-636P-201ENST00000384598 107 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-136P-201ENST00000384663 107 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU7-187P-201ENST00000458985 68 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU7-67P-201ENST00000459003 62 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 AL662814.1-201ENST00000617364 121 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 Z97988.1-201ENST00000637697 135 ntBASIC-0.67□□□□□ -2.52
ABCA1O95477 RNU6-500P-201ENST00000362349 107 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 RNU4-66P-201ENST00000365199 138 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 MTCYBP8-201ENST00000422855 651 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AC006210.1-201ENST00000424882 111 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 EIF1P2-201ENST00000428233 350 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 USP9YP12-201ENST00000450481 570 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-0.68□□□□□ -2.52
ABCA1O95477 RNU6-1194P-201ENST00000516208 104 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.68□□□□□ -2.52
ABCA1O95477 SNORA70.25-201ENST00000612741 95 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AC084368.1-201ENST00000620935 65 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AL596211.1-201ENST00000569873 2277 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 SNORD14E-201ENST00000364009 85 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 Y_RNA.450-201ENST00000384198 113 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 RNU6-1145P-201ENST00000384246 107 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 MTND3P21-201ENST00000433774 331 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.68□□□□□ -2.52
ABCA1O95477 RNU7-180P-201ENST00000459240 63 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AL021368.1-201ENST00000607490 540 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 MIR6129-201ENST00000616087 109 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 AC005609.4-201ENST00000625071 447 ntBASIC-0.68□□□□□ -2.52
ABCA1O95477 RNU6-490P-201ENST00000362985 107 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 RNU6-370P-201ENST00000411008 104 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.69□□□□□ -2.52
ABCA1O95477 AL033528.1-201ENST00000453780 140 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 Y_RNA.378-201ENST00000365652 113 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 RNA5SP475-201ENST00000410568 110 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 SUMO1P3-201ENST00000439961 304 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-0.69□□□□□ -2.52
ABCA1O95477 RNU6-329P-201ENST00000459618 107 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 AC091179.3-201ENST00000474761 144 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 MTCO1P29-201ENST00000496868 288 ntBASIC-0.69□□□□□ -2.52
ABCA1O95477 RNA5SP470-201ENST00000516463 106 ntBASIC-0.69□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms