Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.48□□□□□ -2.01
RAPGEF3O95398 RNU2-4P-201ENST00000606190 192 ntBASIC2.48□□□□□ -2.01
RAPGEF3O95398 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.48□□□□□ -2.01
RAPGEF3O95398 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
RAPGEF3O95398 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
RAPGEF3O95398 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
RAPGEF3O95398 Y_RNA.75-201ENST00000362927 97 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 RNU6-112P-201ENST00000363599 104 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 RNU6-1209P-201ENST00000363655 107 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 Y_RNA.180-201ENST00000363867 113 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 Y_RNA.253-201ENST00000364562 112 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 RNU6-209P-201ENST00000384118 107 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 RNU6-886P-201ENST00000384319 105 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 Y_RNA.572-201ENST00000384757 98 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 RNA5SP482-201ENST00000391269 118 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 AL606517.2-201ENST00000442855 241 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.47□□□□□ -2.01
RAPGEF3O95398 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.47□□□□□ -2.01
RAPGEF3O95398 Y_RNA.662-201ENST00000516028 97 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 RNU6-861P-201ENST00000516745 106 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 RNA5SP481-201ENST00000516814 122 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 Y_RNA.714-201ENST00000517065 90 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 AC022559.1-201ENST00000520905 205 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 MRPS18CP4-201ENST00000535821 231 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 MIR4419B-201ENST00000577260 68 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 SNORA28-201ENST00000606769 126 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 MIR8054-201ENST00000620877 86 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 AC005336.3-201ENST00000623833 2679 ntBASIC2.47□□□□□ -2.01
RAPGEF3O95398 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
RAPGEF3O95398 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
RAPGEF3O95398 Y_RNA.182-201ENST00000363880 111 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 RNU6-312P-201ENST00000364629 107 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 RN7SKP200-201ENST00000410564 320 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 AC245047.8-201ENST00000456455 284 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 SCARNA8-201ENST00000515924 131 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 MIR514B-201ENST00000516774 80 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 RPL23AP91-201ENST00000569211 455 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 AC087685.1-201ENST00000587507 141 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 PVT1_3.1-201ENST00000620853 95 ntBASIC2.46□□□□□ -2.02
RAPGEF3O95398 Y_RNA.23-201ENST00000362496 106 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 RNU6-275P-201ENST00000364910 107 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 RNU6-296P-201ENST00000384608 107 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 RNU6-440P-201ENST00000390882 105 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 RNU6-578P-201ENST00000390980 103 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 MIR1323-201ENST00000408090 73 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 RNU2-7P-201ENST00000410794 178 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 RNU6-717P-201ENST00000459076 104 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 SNORD11-201ENST00000459124 84 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.45□□□□□ -2.02
RAPGEF3O95398 RPS27P21-201ENST00000486977 252 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 RNU6-1219P-201ENST00000516143 112 ntBASIC2.45□□□□□ -2.02
RAPGEF3O95398 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.45□□□□□ -2.02
RAPGEF3O95398 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
RAPGEF3O95398 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
RAPGEF3O95398 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
RAPGEF3O95398 ZNF702P-202ENST00000434269 1966 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 Y_RNA.242-201ENST00000364473 110 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 Y_RNA.354-201ENST00000365448 111 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 RNA5SP100-201ENST00000410903 110 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 RNA5SP59-201ENST00000410922 110 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 RNU2-55P-201ENST00000411146 174 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 RNU6-126P-201ENST00000516685 103 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 RNU1-40P-201ENST00000516816 164 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 RNU6-453P-201ENST00000516819 85 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 RNU1-97P-201ENST00000516872 164 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 AC108706.1-201ENST00000611053 297 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 AL157834.3-201ENST00000615543 103 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 uc_338.4-201ENST00000616635 176 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.44□□□□□ -2.02
RAPGEF3O95398 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC2.43□□□□□ -2.02
RAPGEF3O95398 Y_RNA.150-201ENST00000363562 102 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 Y_RNA.265-201ENST00000364677 108 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 RNA5SP212-201ENST00000391223 107 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 AL606845.1-201ENST00000404881 255 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 AL158823.1-201ENST00000418441 478 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 SNRPGP10-201ENST00000432323 225 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 RPL23AP6-201ENST00000446637 472 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 AC109810.1-201ENST00000534066 224 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 MIR4762-201ENST00000585261 75 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 AL591926.4-201ENST00000616895 298 ntBASIC2.43□□□□□ -2.02
RAPGEF3O95398 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
RAPGEF3O95398 AL596028.1-201ENST00000326971 197 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 MIR126-201ENST00000362291 85 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 U8.5-201ENST00000364528 136 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 RNU6-728P-201ENST00000365375 104 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 Y_RNA.412-201ENST00000384001 104 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 PCNPP3-201ENST00000393579 471 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 AL034345.1-201ENST00000407768 123 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 FTH1P12-201ENST00000432137 551 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 MIR6515-201ENST00000619843 57 ntBASIC2.42□□□□□ -2.02
RAPGEF3O95398 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.42□□□□□ -2.02
RAPGEF3O95398 ZNF209P-201ENST00000593450 2304 ntBASIC2.41□□□□□ -2.02
RAPGEF3O95398 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
RAPGEF3O95398 MT-TT-201ENST00000387460 66 ntBASIC2.41□□□□□ -2.02
RAPGEF3O95398 SNORA67.6-201ENST00000391093 99 ntBASIC2.41□□□□□ -2.02
RAPGEF3O95398 Y_RNA.587-201ENST00000391210 103 ntBASIC2.41□□□□□ -2.02
RAPGEF3O95398 RNA5SP338-201ENST00000410495 85 ntBASIC2.41□□□□□ -2.02
RAPGEF3O95398 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms