Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIR548H3-201ENST00000408771 118 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 Y_RNA.590-201ENST00000410140 107 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 RNU6-651P-201ENST00000411040 105 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-2O95096 AL354695.1-201ENST00000427935 228 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 AC023449.1-201ENST00000454464 154 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 snoU13.23-201ENST00000458863 104 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.35□□□□□ -2.19
NKX2-2O95096 AC100767.1-201ENST00000528178 123 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-2O95096 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.35□□□□□ -2.19
NKX2-2O95096 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
NKX2-2O95096 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NKX2-2O95096 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
NKX2-2O95096 U8.1-201ENST00000362843 134 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 Y_RNA.122-201ENST00000363331 96 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 MIR802-201ENST00000390235 94 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 SNORD72-201ENST00000390994 80 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 RNU6-1132P-201ENST00000459214 107 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 AC006006.1-201ENST00000603082 144 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 uc_338.4-201ENST00000616635 176 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 U4.1-201ENST00000620349 87 ntBASIC1.34□□□□□ -2.19
NKX2-2O95096 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX2-2O95096 Y_RNA.304-201ENST00000365011 112 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 RNU6-1138P-201ENST00000365359 106 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 SNORD38C-201ENST00000384381 69 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 MIR626-201ENST00000385032 94 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 MIR516B2-201ENST00000385190 85 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.33□□□□□ -2.2
NKX2-2O95096 AC245047.8-201ENST00000456455 284 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 RNU6-830P-201ENST00000516353 107 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 AL162730.1-201ENST00000605734 292 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 AC006441.5-201ENST00000612680 209 ntBASIC1.33□□□□□ -2.2
NKX2-2O95096 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
NKX2-2O95096 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
NKX2-2O95096 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
NKX2-2O95096 RNU6-268P-201ENST00000364174 107 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 RNU4-10P-201ENST00000364383 140 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 Y_RNA.416-201ENST00000384014 113 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 RNU6-997P-201ENST00000384725 107 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 Y_RNA.638-201ENST00000459374 113 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 Y_RNA.679-201ENST00000516416 91 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 RNU7-149P-201ENST00000516739 59 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 SNORA74.3-201ENST00000517108 154 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.32□□□□□ -2.2
NKX2-2O95096 AC015712.3-201ENST00000559380 164 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 MIR4643-201ENST00000577473 78 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 BX284668.6-201ENST00000606899 438 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 MIR8065-201ENST00000620577 100 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 MIR7843-201ENST00000622274 79 ntBASIC1.32□□□□□ -2.2
NKX2-2O95096 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
NKX2-2O95096 Y_RNA.277-201ENST00000364754 102 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 RNU6-196P-201ENST00000384315 107 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 RNU6-1054P-201ENST00000411293 104 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 SNRPGP13-201ENST00000442212 177 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 RNU1-98P-201ENST00000458992 160 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 SNORD77.4-201ENST00000516158 81 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 SNORD111.1-201ENST00000516421 86 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 MIR4503-201ENST00000582187 83 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 AL049861.1-201ENST00000603130 150 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 AC062037.2-201ENST00000610137 73 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.31□□□□□ -2.2
NKX2-2O95096 Y_RNA.24-201ENST00000362508 103 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 Y_RNA.229-201ENST00000364347 113 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 Y_RNA.452-201ENST00000384202 108 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 SNORD58.1-201ENST00000391313 66 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 RPL39P39-201ENST00000455840 151 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 RPS29P23-201ENST00000458635 123 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 AC108210.2-201ENST00000503681 201 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 RNA5SP61-201ENST00000516453 100 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 MIR4662B-201ENST00000579498 81 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 MIR4298-201ENST00000584380 73 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 AC011921.3-201ENST00000605540 361 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 AL442067.1-201ENST00000613261 223 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.3□□□□□ -2.2
NKX2-2O95096 Y_RNA.20-201ENST00000362479 113 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 Y_RNA.54-201ENST00000362766 105 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 Y_RNA.76-201ENST00000362931 109 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 Y_RNA.193-201ENST00000363979 102 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 RNU6-702P-201ENST00000364982 107 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 Y_RNA.350-201ENST00000365409 98 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 RNU6-463P-201ENST00000384340 107 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 Y_RNA.478-201ENST00000384358 107 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 Y_RNA.572-201ENST00000384757 98 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 SNORA17.3-201ENST00000391159 129 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 SNORD123-201ENST00000459473 70 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 RNU7-43P-201ENST00000516554 64 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 AL365265.1-201ENST00000621045 234 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 7SK.10-201ENST00000621414 298 ntBASIC1.29□□□□□ -2.2
NKX2-2O95096 RNU6-653P-201ENST00000363074 106 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 Y_RNA.144-201ENST00000363521 113 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.28□□□□□ -2.2
NKX2-2O95096 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.28□□□□□ -2.2
NKX2-2O95096 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.28□□□□□ -2.2
NKX2-2O95096 MTND1P19-201ENST00000511780 315 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms