Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.21□□□□□ -2.06
CDKL5O76039 AL096840.1-201ENST00000603287 93 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 AC012493.3-201ENST00000604494 112 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.21□□□□□ -2.06
CDKL5O76039 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CDKL5O76039 SNORA25.7-201ENST00000364375 127 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 RNU6-915P-201ENST00000364943 103 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 RNU1-148P-201ENST00000384472 162 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 SNORD72-201ENST00000390994 80 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 RNU11-5P-201ENST00000391216 129 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 SUMO2P12-201ENST00000405924 140 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
CDKL5O76039 AL606517.2-201ENST00000442855 241 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 RNU2-56P-201ENST00000516826 190 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 AP001328.1-201ENST00000528550 176 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 AC026271.5-201ENST00000577873 130 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 SNRPGP19-201ENST00000603826 189 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 AC011603.4-201ENST00000611325 277 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 AL591926.4-201ENST00000616895 298 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 TUG1_4.1-201ENST00000619464 181 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 AP001340.1-201ENST00000624405 217 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.2□□□□□ -2.06
CDKL5O76039 AC245060.5-201ENST00000610778 3293 ntBASIC2.2□□□□□ -2.06
CDKL5O76039 Y_RNA.66-201ENST00000362862 102 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 Y_RNA.127-201ENST00000363386 109 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 MIR539-201ENST00000365690 78 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 SNORD116-14-201ENST00000383894 92 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 SNORD116-17-201ENST00000383929 92 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 SNORD116-15-201ENST00000384445 92 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 SNORD116-19-201ENST00000384729 92 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 MIR515-2-201ENST00000384883 83 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 MIR515-1-201ENST00000384884 83 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 BX510359.4-201ENST00000423750 193 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 RNU6-1333P-201ENST00000516162 93 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 AC024995.1-201ENST00000523014 93 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 AC007751.1-201ENST00000529260 376 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 MIR4662B-201ENST00000579498 81 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 AC104984.5-201ENST00000586878 94 ntBASIC2.19□□□□□ -2.06
CDKL5O76039 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.19□□□□□ -2.06
CDKL5O76039 Y_RNA.584-201ENST00000391090 114 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 AL358944.1-201ENST00000528537 144 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 AP002004.2-201ENST00000531656 154 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC2.18□□□□□ -2.06
CDKL5O76039 AC008507.4-201ENST00000585464 127 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 AC022217.4-201ENST00000604389 163 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 U7.2-201ENST00000607576 63 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 AL627230.6-201ENST00000611129 280 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 MIR6715A-201ENST00000615929 79 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.18□□□□□ -2.06
CDKL5O76039 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CDKL5O76039 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDKL5O76039 MIR126-201ENST00000362291 85 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 U8.1-201ENST00000362843 134 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 Y_RNA.294-201ENST00000364916 102 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 MIR676-201ENST00000390702 67 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 SNORA26-201ENST00000391286 122 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 MLLT10P1-201ENST00000418346 262 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.17□□□□□ -2.06
CDKL5O76039 RNU7-94P-201ENST00000459576 63 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 AL049830.1-201ENST00000468034 425 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 Y_RNA.686-201ENST00000516548 134 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 RNU6-365P-201ENST00000517113 106 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 MIR3124-201ENST00000582636 67 ntBASIC2.17□□□□□ -2.06
CDKL5O76039 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
CDKL5O76039 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CDKL5O76039 RNU1-58P-201ENST00000362413 163 ntBASIC2.16□□□□□ -2.06
CDKL5O76039 SNORA16.1-201ENST00000364597 132 ntBASIC2.16□□□□□ -2.06
CDKL5O76039 RNA5SP205-201ENST00000364653 136 ntBASIC2.16□□□□□ -2.06
CDKL5O76039 RNU6-80P-201ENST00000384195 107 ntBASIC2.16□□□□□ -2.06
CDKL5O76039 MIR522-201ENST00000385071 87 ntBASIC2.16□□□□□ -2.06
CDKL5O76039 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
CDKL5O76039 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
CDKL5O76039 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.16□□□□□ -2.06
CDKL5O76039 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.16□□□□□ -2.06
CDKL5O76039 MIR3126-201ENST00000577443 74 ntBASIC2.16□□□□□ -2.06
CDKL5O76039 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CDKL5O76039 Y_RNA.525-201ENST00000384570 113 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 MIR597-201ENST00000384968 97 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 RNA5SP109-201ENST00000391010 116 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 AL445685.2-201ENST00000422551 342 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 AC245047.3-201ENST00000429428 127 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 snoU13.26-201ENST00000459452 105 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 RN7SL274P-201ENST00000492268 272 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.15□□□□□ -2.07
CDKL5O76039 RNA5SP182-201ENST00000516064 82 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 RNU6-126P-201ENST00000516685 103 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 RNU2-60P-201ENST00000517290 128 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 AC131055.1-201ENST00000584626 316 ntBASIC2.15□□□□□ -2.07
CDKL5O76039 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CDKL5O76039 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
CDKL5O76039 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CDKL5O76039 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
CDKL5O76039 SNORD68-201ENST00000363214 84 ntBASIC2.14□□□□□ -2.07
CDKL5O76039 SNORA1-201ENST00000384107 130 ntBASIC2.14□□□□□ -2.07
CDKL5O76039 SNORD61-201ENST00000384252 73 ntBASIC2.14□□□□□ -2.07
CDKL5O76039 MIR29C-201ENST00000385231 88 ntBASIC2.14□□□□□ -2.07
CDKL5O76039 FTH1P12-201ENST00000432137 551 ntBASIC2.14□□□□□ -2.07
CDKL5O76039 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.14□□□□□ -2.07
CDKL5O76039 RNU4-57P-201ENST00000515980 135 ntBASIC2.14□□□□□ -2.07
CDKL5O76039 Y_RNA.666-201ENST00000516187 112 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 120.5 ms