Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 RNA5SP137-201ENST00000516833 135 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 SNORA31.25-201ENST00000517242 134 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 MIR4769-201ENST00000584126 77 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 AC005786.1-201ENST00000588553 154 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 SNRPGP19-201ENST00000603826 189 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 AC069114.2-201ENST00000604699 304 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 AL591926.4-201ENST00000616895 298 ntBASIC1.91□□□□□ -2.1
CNOT3O75175 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
CNOT3O75175 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.1
CNOT3O75175 Y_RNA.91-201ENST00000363042 107 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 Y_RNA.393-201ENST00000383936 102 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 RNU6-484P-201ENST00000384016 107 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 Y_RNA.568-201ENST00000384742 113 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 RNA5SP109-201ENST00000391010 116 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 RNU6-588P-201ENST00000410281 105 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 RNU2-55P-201ENST00000411146 174 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.9□□□□□ -2.11
CNOT3O75175 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.9□□□□□ -2.11
CNOT3O75175 RNU2-19P-201ENST00000517288 84 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 AC015712.3-201ENST00000559380 164 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 MIR4287-201ENST00000579398 78 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.9□□□□□ -2.11
CNOT3O75175 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
CNOT3O75175 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
CNOT3O75175 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CNOT3O75175 Y_RNA.265-201ENST00000364677 108 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 RNU6-1336P-201ENST00000383886 109 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 SNORA26-201ENST00000391286 122 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 AL606517.2-201ENST00000442855 241 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.89□□□□□ -2.11
CNOT3O75175 Y_RNA.714-201ENST00000517065 90 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 AC090142.3-201ENST00000519012 385 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.89□□□□□ -2.11
CNOT3O75175 MIR4529-201ENST00000578110 78 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 MIR5089-201ENST00000580047 84 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 AC120024.3-201ENST00000603167 156 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 AC022513.1-201ENST00000624512 117 ntBASIC1.89□□□□□ -2.11
CNOT3O75175 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
CNOT3O75175 ZNF355P-201ENST00000427301 3216 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 AC010332.2-201ENST00000613083 1904 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 Y_RNA.634-201ENST00000364811 113 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 MIR518A2-201ENST00000384966 87 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 SNORA75.5-201ENST00000391291 81 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 RNA5SP489-201ENST00000410986 109 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.88□□□□□ -2.11
CNOT3O75175 NDUFA4P2-201ENST00000489989 244 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 MRPS17P9-201ENST00000511924 393 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 RNU6-237P-201ENST00000515985 71 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 AL358944.1-201ENST00000528537 144 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 MIR4662B-201ENST00000579498 81 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 MIR6845-201ENST00000613182 61 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.88□□□□□ -2.11
CNOT3O75175 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
CNOT3O75175 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CNOT3O75175 RNU6-1084P-201ENST00000362498 107 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 SNORA25.7-201ENST00000364375 127 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 Y_RNA.420-201ENST00000384043 110 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 Y_RNA.486-201ENST00000384398 107 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 RNU6-257P-201ENST00000410238 98 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 HMGN2P23-201ENST00000456759 269 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 RNA5SP153-201ENST00000516498 76 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 RNU6-365P-201ENST00000517113 106 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 AC084364.2-201ENST00000546924 395 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 DEFB122-202ENST00000569013 197 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 MIR3646-201ENST00000578301 84 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.87□□□□□ -2.11
CNOT3O75175 RNU6-1019P-201ENST00000364424 107 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 RNU6-1082P-201ENST00000364574 107 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 RNU6-1138P-201ENST00000365359 106 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 SNORA40-201ENST00000388090 126 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 SNORD72-201ENST00000390994 80 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 RNU6-460P-201ENST00000391158 108 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 HMGN2P39-201ENST00000398005 273 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 RNU2-7P-201ENST00000410794 178 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.86□□□□□ -2.11
CNOT3O75175 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.86□□□□□ -2.11
CNOT3O75175 STAG3L5P-204ENST00000443759 179 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 AC108210.2-201ENST00000503681 201 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CNOT3O75175 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.86□□□□□ -2.11
CNOT3O75175 RNA5SP99-201ENST00000364020 114 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 MIR522-201ENST00000385071 87 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CNOT3O75175 MIR676-201ENST00000390702 67 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 Y_RNA.586-201ENST00000391146 98 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 RNA5SP465-201ENST00000391195 109 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 MIR1283-2-201ENST00000408621 87 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.85□□□□□ -2.11
CNOT3O75175 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CNOT3O75175 RPL31P63-201ENST00000422565 375 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 AC245047.4-201ENST00000433189 144 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 RNVU1-2-201ENST00000516326 135 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 RNU6-126P-201ENST00000516685 103 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 RNU6-1270P-201ENST00000517128 108 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 AC008507.4-201ENST00000585464 127 ntBASIC1.85□□□□□ -2.11
CNOT3O75175 AC008555.8-201ENST00000623602 2168 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms