Protein–RNA interactions for Protein: O60749

SNX2, Sorting nexin-2, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2O60749 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.88□□□□□ -2.11
SNX2O60749 SNORD33-201ENST00000362761 85 ntBASIC1.87□□□□□ -2.11
SNX2O60749 Y_RNA.182-201ENST00000363880 111 ntBASIC1.87□□□□□ -2.11
SNX2O60749 Y_RNA.233-201ENST00000364407 101 ntBASIC1.87□□□□□ -2.11
SNX2O60749 SNORD50B-201ENST00000364995 70 ntBASIC1.87□□□□□ -2.11
SNX2O60749 MIR764-201ENST00000390811 85 ntBASIC1.87□□□□□ -2.11
SNX2O60749 SNORD72-201ENST00000390994 80 ntBASIC1.87□□□□□ -2.11
SNX2O60749 RNU6-131P-201ENST00000391144 107 ntBASIC1.87□□□□□ -2.11
SNX2O60749 RNU1-78P-201ENST00000391248 165 ntBASIC1.87□□□□□ -2.11
SNX2O60749 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
SNX2O60749 RNU7-120P-201ENST00000459334 63 ntBASIC1.87□□□□□ -2.11
SNX2O60749 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.87□□□□□ -2.11
SNX2O60749 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.87□□□□□ -2.11
SNX2O60749 SNORA77B-201ENST00000578179 125 ntBASIC1.87□□□□□ -2.11
SNX2O60749 MIR4744-201ENST00000581563 82 ntBASIC1.87□□□□□ -2.11
SNX2O60749 MIR4524B-201ENST00000581569 115 ntBASIC1.87□□□□□ -2.11
SNX2O60749 AL391903.3-201ENST00000612158 163 ntBASIC1.87□□□□□ -2.11
SNX2O60749 uc_338.4-201ENST00000616635 176 ntBASIC1.87□□□□□ -2.11
SNX2O60749 RNU6-682P-201ENST00000363843 106 ntBASIC1.86□□□□□ -2.11
SNX2O60749 Y_RNA.412-201ENST00000384001 104 ntBASIC1.86□□□□□ -2.11
SNX2O60749 Y_RNA.435-201ENST00000384095 112 ntBASIC1.86□□□□□ -2.11
SNX2O60749 RNU6-424P-201ENST00000384367 105 ntBASIC1.86□□□□□ -2.11
SNX2O60749 RNU4-70P-201ENST00000384579 139 ntBASIC1.86□□□□□ -2.11
SNX2O60749 U8.13-201ENST00000390842 128 ntBASIC1.86□□□□□ -2.11
SNX2O60749 Y_RNA.622-201ENST00000411091 108 ntBASIC1.86□□□□□ -2.11
SNX2O60749 PIGPP3-201ENST00000425307 415 ntBASIC1.86□□□□□ -2.11
SNX2O60749 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX2O60749 SNRPGP8-201ENST00000454064 226 ntBASIC1.86□□□□□ -2.11
SNX2O60749 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.86□□□□□ -2.11
SNX2O60749 RNU6-861P-201ENST00000516745 106 ntBASIC1.86□□□□□ -2.11
SNX2O60749 RNU6-182P-201ENST00000516970 105 ntBASIC1.86□□□□□ -2.11
SNX2O60749 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX2O60749 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.86□□□□□ -2.11
SNX2O60749 AC108706.1-201ENST00000611053 297 ntBASIC1.86□□□□□ -2.11
SNX2O60749 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.86□□□□□ -2.11
SNX2O60749 U6.106-201ENST00000636360 105 ntBASIC1.86□□□□□ -2.11
SNX2O60749 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
SNX2O60749 Y_RNA.121-201ENST00000363309 113 ntBASIC1.85□□□□□ -2.11
SNX2O60749 RNU6-103P-201ENST00000363686 107 ntBASIC1.85□□□□□ -2.11
SNX2O60749 RNU6-578P-201ENST00000390980 103 ntBASIC1.85□□□□□ -2.11
SNX2O60749 AC245517.4-201ENST00000448601 281 ntBASIC1.85□□□□□ -2.11
SNX2O60749 HSPE1P24-201ENST00000450782 238 ntBASIC1.85□□□□□ -2.11
SNX2O60749 AC108210.2-201ENST00000503681 201 ntBASIC1.85□□□□□ -2.11
SNX2O60749 AC114811.1-201ENST00000507207 168 ntBASIC1.85□□□□□ -2.11
SNX2O60749 Y_RNA.797-201ENST00000515977 94 ntBASIC1.85□□□□□ -2.11
SNX2O60749 RNU7-149P-201ENST00000516739 59 ntBASIC1.85□□□□□ -2.11
SNX2O60749 RNU6-548P-201ENST00000517083 115 ntBASIC1.85□□□□□ -2.11
SNX2O60749 AC008507.4-201ENST00000585464 127 ntBASIC1.85□□□□□ -2.11
SNX2O60749 AC072026.1-201ENST00000605023 201 ntBASIC1.85□□□□□ -2.11
SNX2O60749 MIR6845-201ENST00000613182 61 ntBASIC1.85□□□□□ -2.11
SNX2O60749 ICE2P2-201ENST00000483823 2787 ntBASIC1.84□□□□□ -2.11
SNX2O60749 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
SNX2O60749 MIR194-1-201ENST00000384892 85 ntBASIC1.84□□□□□ -2.11
SNX2O60749 RNU6-1228P-201ENST00000391014 107 ntBASIC1.84□□□□□ -2.11
SNX2O60749 PGBD4P5-201ENST00000445958 426 ntBASIC1.84□□□□□ -2.11
SNX2O60749 AC093850.1-201ENST00000454121 251 ntBASIC1.84□□□□□ -2.11
SNX2O60749 AC005908.1-201ENST00000468701 347 ntBASIC1.84□□□□□ -2.11
SNX2O60749 AC074198.2-201ENST00000508153 258 ntBASIC1.84□□□□□ -2.11
SNX2O60749 SNORD77.4-201ENST00000516158 81 ntBASIC1.84□□□□□ -2.11
SNX2O60749 SNORD45.4-201ENST00000516629 73 ntBASIC1.84□□□□□ -2.11
SNX2O60749 AC109810.1-201ENST00000534066 224 ntBASIC1.84□□□□□ -2.11
SNX2O60749 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.84□□□□□ -2.11
SNX2O60749 AC015712.3-201ENST00000559380 164 ntBASIC1.84□□□□□ -2.11
SNX2O60749 DEFB122-202ENST00000569013 197 ntBASIC1.84□□□□□ -2.11
SNX2O60749 AC120024.3-201ENST00000603167 156 ntBASIC1.84□□□□□ -2.11
SNX2O60749 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SNX2O60749 RNU6-1084P-201ENST00000362498 107 ntBASIC1.83□□□□□ -2.12
SNX2O60749 Y_RNA.150-201ENST00000363562 102 ntBASIC1.83□□□□□ -2.12
SNX2O60749 SNORA16.1-201ENST00000364597 132 ntBASIC1.83□□□□□ -2.12
SNX2O60749 AL161935.2-201ENST00000414627 60 ntBASIC1.83□□□□□ -2.12
SNX2O60749 snoU13.23-201ENST00000458863 104 ntBASIC1.83□□□□□ -2.12
SNX2O60749 RNU7-12P-201ENST00000516030 62 ntBASIC1.83□□□□□ -2.12
SNX2O60749 RNA5SP182-201ENST00000516064 82 ntBASIC1.83□□□□□ -2.12
SNX2O60749 MIR4778-201ENST00000577635 80 ntBASIC1.83□□□□□ -2.12
SNX2O60749 Pinc.1-201ENST00000616452 154 ntBASIC1.83□□□□□ -2.12
SNX2O60749 FTX_2.1-201ENST00000618816 94 ntBASIC1.83□□□□□ -2.12
SNX2O60749 SNORD45.3-201ENST00000363836 72 ntBASIC1.82□□□□□ -2.12
SNX2O60749 RNU6-163P-201ENST00000384396 106 ntBASIC1.82□□□□□ -2.12
SNX2O60749 Y_RNA.486-201ENST00000384398 107 ntBASIC1.82□□□□□ -2.12
SNX2O60749 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.82□□□□□ -2.12
SNX2O60749 AC023449.1-201ENST00000454464 154 ntBASIC1.82□□□□□ -2.12
SNX2O60749 AL513423.1-201ENST00000621695 132 ntBASIC1.82□□□□□ -2.12
SNX2O60749 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
SNX2O60749 Y_RNA.75-201ENST00000362927 97 ntBASIC1.81□□□□□ -2.12
SNX2O60749 RNU6-275P-201ENST00000364910 107 ntBASIC1.81□□□□□ -2.12
SNX2O60749 snoU2-30.1-201ENST00000365012 70 ntBASIC1.81□□□□□ -2.12
SNX2O60749 RNU6-484P-201ENST00000384016 107 ntBASIC1.81□□□□□ -2.12
SNX2O60749 RNY3P5-201ENST00000384127 102 ntBASIC1.81□□□□□ -2.12
SNX2O60749 MIR660-201ENST00000385235 97 ntBASIC1.81□□□□□ -2.12
SNX2O60749 AC004965.1-201ENST00000413033 213 ntBASIC1.81□□□□□ -2.12
SNX2O60749 AL121914.1-201ENST00000450188 156 ntBASIC1.81□□□□□ -2.12
SNX2O60749 CYCTP-201ENST00000504253 315 ntBASIC1.81□□□□□ -2.12
SNX2O60749 RNA5SP445-201ENST00000515889 115 ntBASIC1.81□□□□□ -2.12
SNX2O60749 Y_RNA.714-201ENST00000517065 90 ntBASIC1.81□□□□□ -2.12
SNX2O60749 MRPS18CP4-201ENST00000535821 231 ntBASIC1.81□□□□□ -2.12
SNX2O60749 SNORD3E-202ENST00000627253 216 ntBASIC1.81□□□□□ -2.12
SNX2O60749 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
SNX2O60749 RNA5SP99-201ENST00000364020 114 ntBASIC1.8□□□□□ -2.12
SNX2O60749 RNU6-1138P-201ENST00000365359 106 ntBASIC1.8□□□□□ -2.12
SNX2O60749 MIR15B-201ENST00000385045 98 ntBASIC1.8□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms