Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 RNA5SP482-201ENST00000391269 118 ntBASIC1.52□□□□□ -2.17
PRKNO60260 PCNPP3-201ENST00000393579 471 ntBASIC1.52□□□□□ -2.17
PRKNO60260 AL034345.1-201ENST00000407768 123 ntBASIC1.52□□□□□ -2.17
PRKNO60260 SNRPGP10-201ENST00000432323 225 ntBASIC1.52□□□□□ -2.17
PRKNO60260 OR9P1P-201ENST00000496431 281 ntBASIC1.52□□□□□ -2.17
PRKNO60260 AC108729.3-201ENST00000513484 108 ntBASIC1.52□□□□□ -2.17
PRKNO60260 MIR2681-201ENST00000581814 105 ntBASIC1.52□□□□□ -2.17
PRKNO60260 MIR4713-201ENST00000582691 75 ntBASIC1.52□□□□□ -2.17
PRKNO60260 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.52□□□□□ -2.17
PRKNO60260 AC072026.1-201ENST00000605023 201 ntBASIC1.52□□□□□ -2.17
PRKNO60260 SNORA28-201ENST00000606769 126 ntBASIC1.52□□□□□ -2.17
PRKNO60260 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PRKNO60260 ICE2P2-201ENST00000483823 2787 ntBASIC1.52□□□□□ -2.17
PRKNO60260 snoU2_19.4-201ENST00000364329 80 ntBASIC1.51□□□□□ -2.17
PRKNO60260 Y_RNA.233-201ENST00000364407 101 ntBASIC1.51□□□□□ -2.17
PRKNO60260 Y_RNA.270-201ENST00000364693 104 ntBASIC1.51□□□□□ -2.17
PRKNO60260 RNU6-886P-201ENST00000384319 105 ntBASIC1.51□□□□□ -2.17
PRKNO60260 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.51□□□□□ -2.17
PRKNO60260 AC245047.8-201ENST00000456455 284 ntBASIC1.51□□□□□ -2.17
PRKNO60260 RNU6-861P-201ENST00000516745 106 ntBASIC1.51□□□□□ -2.17
PRKNO60260 RNU7-28P-201ENST00000516759 62 ntBASIC1.51□□□□□ -2.17
PRKNO60260 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.51□□□□□ -2.17
PRKNO60260 AC024614.2-201ENST00000577584 372 ntBASIC1.51□□□□□ -2.17
PRKNO60260 MIR4303-201ENST00000581299 66 ntBASIC1.51□□□□□ -2.17
PRKNO60260 Y_RNA.180-201ENST00000363867 113 ntBASIC1.5□□□□□ -2.17
PRKNO60260 Y_RNA.229-201ENST00000364347 113 ntBASIC1.5□□□□□ -2.17
PRKNO60260 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
PRKNO60260 RNU6-360P-201ENST00000390944 104 ntBASIC1.5□□□□□ -2.17
PRKNO60260 RNU6-381P-201ENST00000391259 108 ntBASIC1.5□□□□□ -2.17
PRKNO60260 MIR1323-201ENST00000408090 73 ntBASIC1.5□□□□□ -2.17
PRKNO60260 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.5□□□□□ -2.17
PRKNO60260 RNU6-453P-201ENST00000516819 85 ntBASIC1.5□□□□□ -2.17
PRKNO60260 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.5□□□□□ -2.17
PRKNO60260 AL049861.1-201ENST00000603130 150 ntBASIC1.5□□□□□ -2.17
PRKNO60260 AC021506.2-201ENST00000612354 169 ntBASIC1.5□□□□□ -2.17
PRKNO60260 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
PRKNO60260 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.5□□□□□ -2.17
PRKNO60260 Y_RNA.571-201ENST00000384753 98 ntBASIC1.49□□□□□ -2.17
PRKNO60260 MIR522-201ENST00000385071 87 ntBASIC1.49□□□□□ -2.17
PRKNO60260 MT-TT-201ENST00000387460 66 ntBASIC1.49□□□□□ -2.17
PRKNO60260 RNU6-131P-201ENST00000391144 107 ntBASIC1.49□□□□□ -2.17
PRKNO60260 RN7SKP101-201ENST00000411376 320 ntBASIC1.49□□□□□ -2.17
PRKNO60260 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.49□□□□□ -2.17
PRKNO60260 AC108667.1-201ENST00000428618 249 ntBASIC1.49□□□□□ -2.17
PRKNO60260 CALM2P4-201ENST00000430810 426 ntBASIC1.49□□□□□ -2.17
PRKNO60260 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.49□□□□□ -2.17
PRKNO60260 SNORD11-201ENST00000459124 84 ntBASIC1.49□□□□□ -2.17
PRKNO60260 AC074198.2-201ENST00000508153 258 ntBASIC1.49□□□□□ -2.17
PRKNO60260 SCARNA8-201ENST00000515924 131 ntBASIC1.49□□□□□ -2.17
PRKNO60260 RNU6-1219P-201ENST00000516143 112 ntBASIC1.49□□□□□ -2.17
PRKNO60260 RNU6-1007P-201ENST00000516586 107 ntBASIC1.49□□□□□ -2.17
PRKNO60260 MIR5688-201ENST00000580619 83 ntBASIC1.49□□□□□ -2.17
PRKNO60260 AL645939.4-201ENST00000604495 135 ntBASIC1.49□□□□□ -2.17
PRKNO60260 RNU2-4P-201ENST00000606190 192 ntBASIC1.49□□□□□ -2.17
PRKNO60260 Y_RNA.7-201ENST00000362352 102 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNU6-1084P-201ENST00000362498 107 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNU6-414P-201ENST00000363705 104 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNU6-203P-201ENST00000384038 104 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNU4-70P-201ENST00000384579 139 ntBASIC1.48□□□□□ -2.17
PRKNO60260 Y_RNA.587-201ENST00000391210 103 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNA5SP496-201ENST00000391240 109 ntBASIC1.48□□□□□ -2.17
PRKNO60260 U8.16-201ENST00000391279 133 ntBASIC1.48□□□□□ -2.17
PRKNO60260 AC023449.1-201ENST00000454464 154 ntBASIC1.48□□□□□ -2.17
PRKNO60260 NDUFA4P2-201ENST00000489989 244 ntBASIC1.48□□□□□ -2.17
PRKNO60260 AC099513.1-201ENST00000490423 301 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNA5SP168-201ENST00000516642 112 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNU6-1116P-201ENST00000517269 99 ntBASIC1.48□□□□□ -2.17
PRKNO60260 RNU1-42P-201ENST00000364033 160 ntBASIC1.47□□□□□ -2.17
PRKNO60260 Y_RNA.240-201ENST00000364469 95 ntBASIC1.47□□□□□ -2.17
PRKNO60260 RN7SKP51-201ENST00000410781 304 ntBASIC1.47□□□□□ -2.17
PRKNO60260 AC008834.1-201ENST00000511612 175 ntBASIC1.47□□□□□ -2.17
PRKNO60260 RNU6-1053P-201ENST00000515930 101 ntBASIC1.47□□□□□ -2.17
PRKNO60260 RN7SKP164-201ENST00000516138 266 ntBASIC1.47□□□□□ -2.17
PRKNO60260 Y_RNA.714-201ENST00000517065 90 ntBASIC1.47□□□□□ -2.17
PRKNO60260 MIR3122-201ENST00000577243 73 ntBASIC1.47□□□□□ -2.17
PRKNO60260 AC103810.8-201ENST00000607347 118 ntBASIC1.47□□□□□ -2.17
PRKNO60260 AL021707.8-201ENST00000609428 183 ntBASIC1.47□□□□□ -2.17
PRKNO60260 AC095038.3-201ENST00000634439 195 ntBASIC1.47□□□□□ -2.17
PRKNO60260 U6.106-201ENST00000636360 105 ntBASIC1.47□□□□□ -2.17
PRKNO60260 MIRLET7C-201ENST00000362160 84 ntBASIC1.46□□□□□ -2.18
PRKNO60260 RNU6-661P-201ENST00000362409 107 ntBASIC1.46□□□□□ -2.18
PRKNO60260 Y_RNA.121-201ENST00000363309 113 ntBASIC1.46□□□□□ -2.18
PRKNO60260 U8.5-201ENST00000364528 136 ntBASIC1.46□□□□□ -2.18
PRKNO60260 RNU6-1062P-201ENST00000383908 107 ntBASIC1.46□□□□□ -2.18
PRKNO60260 Y_RNA.412-201ENST00000384001 104 ntBASIC1.46□□□□□ -2.18
PRKNO60260 RNU6-424P-201ENST00000384367 105 ntBASIC1.46□□□□□ -2.18
PRKNO60260 RNU6-163P-201ENST00000384396 106 ntBASIC1.46□□□□□ -2.18
PRKNO60260 MIR616-201ENST00000385293 97 ntBASIC1.46□□□□□ -2.18
PRKNO60260 MIR934-201ENST00000401241 83 ntBASIC1.46□□□□□ -2.18
PRKNO60260 AL606845.1-201ENST00000404881 255 ntBASIC1.46□□□□□ -2.18
PRKNO60260 FTH1P12-201ENST00000432137 551 ntBASIC1.46□□□□□ -2.18
PRKNO60260 PGBD4P5-201ENST00000445958 426 ntBASIC1.46□□□□□ -2.18
PRKNO60260 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.46□□□□□ -2.18
PRKNO60260 Y_RNA.662-201ENST00000516028 97 ntBASIC1.46□□□□□ -2.18
PRKNO60260 RNU7-12P-201ENST00000516030 62 ntBASIC1.46□□□□□ -2.18
PRKNO60260 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.46□□□□□ -2.18
PRKNO60260 MIR4498-201ENST00000577599 66 ntBASIC1.46□□□□□ -2.18
PRKNO60260 MIR4762-201ENST00000585261 75 ntBASIC1.46□□□□□ -2.18
PRKNO60260 AC120024.3-201ENST00000603167 156 ntBASIC1.46□□□□□ -2.18
PRKNO60260 uc_338.4-201ENST00000616635 176 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 124.9 ms