Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 RNA5SP212-201ENST00000391223 107 ntBASIC1.71□□□□□ -2.14
LDB2O43679 AL034345.1-201ENST00000407768 123 ntBASIC1.71□□□□□ -2.14
LDB2O43679 MIR548I3-201ENST00000408378 149 ntBASIC1.71□□□□□ -2.14
LDB2O43679 MIR548I1-201ENST00000408810 149 ntBASIC1.71□□□□□ -2.14
LDB2O43679 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.71□□□□□ -2.14
LDB2O43679 snoU13.27-201ENST00000459278 104 ntBASIC1.71□□□□□ -2.14
LDB2O43679 OR9P1P-201ENST00000496431 281 ntBASIC1.71□□□□□ -2.14
LDB2O43679 RNU6-1219P-201ENST00000516143 112 ntBASIC1.71□□□□□ -2.14
LDB2O43679 SNORA31.17-201ENST00000516953 127 ntBASIC1.71□□□□□ -2.14
LDB2O43679 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.71□□□□□ -2.14
LDB2O43679 MRPS18CP4-201ENST00000535821 231 ntBASIC1.71□□□□□ -2.14
LDB2O43679 MIR4762-201ENST00000585261 75 ntBASIC1.71□□□□□ -2.14
LDB2O43679 AL049861.1-201ENST00000603130 150 ntBASIC1.71□□□□□ -2.14
LDB2O43679 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.71□□□□□ -2.14
LDB2O43679 AC108706.1-201ENST00000611053 297 ntBASIC1.71□□□□□ -2.14
LDB2O43679 uc_338.4-201ENST00000616635 176 ntBASIC1.71□□□□□ -2.14
LDB2O43679 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.7□□□□□ -2.14
LDB2O43679 SNORD68-201ENST00000363214 84 ntBASIC1.7□□□□□ -2.14
LDB2O43679 Y_RNA.150-201ENST00000363562 102 ntBASIC1.7□□□□□ -2.14
LDB2O43679 RNU6-275P-201ENST00000364910 107 ntBASIC1.7□□□□□ -2.14
LDB2O43679 RNA5SP190-201ENST00000365222 118 ntBASIC1.7□□□□□ -2.14
LDB2O43679 Y_RNA.412-201ENST00000384001 104 ntBASIC1.7□□□□□ -2.14
LDB2O43679 RNU6-886P-201ENST00000384319 105 ntBASIC1.7□□□□□ -2.14
LDB2O43679 RNU6-131P-201ENST00000391144 107 ntBASIC1.7□□□□□ -2.14
LDB2O43679 Y_RNA.587-201ENST00000391210 103 ntBASIC1.7□□□□□ -2.14
LDB2O43679 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.7□□□□□ -2.14
LDB2O43679 AC244636.1-201ENST00000421152 228 ntBASIC1.7□□□□□ -2.14
LDB2O43679 FTH1P12-201ENST00000432137 551 ntBASIC1.7□□□□□ -2.14
LDB2O43679 AL603825.1-201ENST00000438481 80 ntBASIC1.7□□□□□ -2.14
LDB2O43679 RNA5SP57-201ENST00000459463 123 ntBASIC1.7□□□□□ -2.14
LDB2O43679 NDUFA4P2-201ENST00000489989 244 ntBASIC1.7□□□□□ -2.14
LDB2O43679 Y_RNA.662-201ENST00000516028 97 ntBASIC1.7□□□□□ -2.14
LDB2O43679 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.7□□□□□ -2.14
LDB2O43679 AC109810.1-201ENST00000534066 224 ntBASIC1.7□□□□□ -2.14
LDB2O43679 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.7□□□□□ -2.14
LDB2O43679 MIR4709-201ENST00000577272 72 ntBASIC1.7□□□□□ -2.14
LDB2O43679 MIR4255-201ENST00000579351 72 ntBASIC1.7□□□□□ -2.14
LDB2O43679 AC087685.1-201ENST00000587507 141 ntBASIC1.7□□□□□ -2.14
LDB2O43679 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
LDB2O43679 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
LDB2O43679 Y_RNA.23-201ENST00000362496 106 ntBASIC1.69□□□□□ -2.14
LDB2O43679 RNU6-312P-201ENST00000364629 107 ntBASIC1.69□□□□□ -2.14
LDB2O43679 RNU6-728P-201ENST00000365375 104 ntBASIC1.69□□□□□ -2.14
LDB2O43679 RNU6-209P-201ENST00000384118 107 ntBASIC1.69□□□□□ -2.14
LDB2O43679 RNU6-1031P-201ENST00000384773 107 ntBASIC1.69□□□□□ -2.14
LDB2O43679 SNORA12.1-201ENST00000390873 148 ntBASIC1.69□□□□□ -2.14
LDB2O43679 PCNPP3-201ENST00000393579 471 ntBASIC1.69□□□□□ -2.14
LDB2O43679 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.69□□□□□ -2.14
LDB2O43679 RNU7-34P-201ENST00000459394 64 ntBASIC1.69□□□□□ -2.14
LDB2O43679 SNORD77.4-201ENST00000516158 81 ntBASIC1.69□□□□□ -2.14
LDB2O43679 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.69□□□□□ -2.14
LDB2O43679 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.69□□□□□ -2.14
LDB2O43679 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
LDB2O43679 Y_RNA.180-201ENST00000363867 113 ntBASIC1.68□□□□□ -2.14
LDB2O43679 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
LDB2O43679 RN7SKP51-201ENST00000410781 304 ntBASIC1.68□□□□□ -2.14
LDB2O43679 RNU2-55P-201ENST00000411146 174 ntBASIC1.68□□□□□ -2.14
LDB2O43679 MLLT10P1-201ENST00000418346 262 ntBASIC1.68□□□□□ -2.14
LDB2O43679 SNORD13-201ENST00000459299 104 ntBASIC1.68□□□□□ -2.14
LDB2O43679 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
LDB2O43679 AP000942.3-201ENST00000603702 160 ntBASIC1.68□□□□□ -2.14
LDB2O43679 Y_RNA.242-201ENST00000364473 110 ntBASIC1.67□□□□□ -2.14
LDB2O43679 RNU6-1138P-201ENST00000365359 106 ntBASIC1.67□□□□□ -2.14
LDB2O43679 MIR15B-201ENST00000385045 98 ntBASIC1.67□□□□□ -2.14
LDB2O43679 RNU6-360P-201ENST00000390944 104 ntBASIC1.67□□□□□ -2.14
LDB2O43679 RPL30P13-201ENST00000418873 348 ntBASIC1.67□□□□□ -2.14
LDB2O43679 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.67□□□□□ -2.14
LDB2O43679 RNU6-126P-201ENST00000516685 103 ntBASIC1.67□□□□□ -2.14
LDB2O43679 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.67□□□□□ -2.14
LDB2O43679 AC022254.1-201ENST00000567857 235 ntBASIC1.67□□□□□ -2.14
LDB2O43679 MIR4662B-201ENST00000579498 81 ntBASIC1.67□□□□□ -2.14
LDB2O43679 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
LDB2O43679 AC008507.4-201ENST00000585464 127 ntBASIC1.67□□□□□ -2.14
LDB2O43679 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.67□□□□□ -2.14
LDB2O43679 SNORD45.3-201ENST00000363836 72 ntBASIC1.66□□□□□ -2.14
LDB2O43679 RNU4-43P-201ENST00000410628 137 ntBASIC1.66□□□□□ -2.14
LDB2O43679 Y_RNA.622-201ENST00000411091 108 ntBASIC1.66□□□□□ -2.14
LDB2O43679 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.66□□□□□ -2.14
LDB2O43679 AL121914.1-201ENST00000450188 156 ntBASIC1.66□□□□□ -2.14
LDB2O43679 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.66□□□□□ -2.14
LDB2O43679 AC005840.1-201ENST00000498412 377 ntBASIC1.66□□□□□ -2.14
LDB2O43679 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.66□□□□□ -2.14
LDB2O43679 AC074198.2-201ENST00000508153 258 ntBASIC1.66□□□□□ -2.14
LDB2O43679 RNU7-149P-201ENST00000516739 59 ntBASIC1.66□□□□□ -2.14
LDB2O43679 AC021506.2-201ENST00000612354 169 ntBASIC1.66□□□□□ -2.14
LDB2O43679 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.66□□□□□ -2.14
LDB2O43679 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
LDB2O43679 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
LDB2O43679 MIRLET7C-201ENST00000362160 84 ntBASIC1.65□□□□□ -2.15
LDB2O43679 snoU2-30.1-201ENST00000365012 70 ntBASIC1.65□□□□□ -2.15
LDB2O43679 Y_RNA.338-201ENST00000365320 114 ntBASIC1.65□□□□□ -2.15
LDB2O43679 Y_RNA.432-201ENST00000384087 111 ntBASIC1.65□□□□□ -2.15
LDB2O43679 RNU6-424P-201ENST00000384367 105 ntBASIC1.65□□□□□ -2.15
LDB2O43679 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
LDB2O43679 CALM2P4-201ENST00000430810 426 ntBASIC1.65□□□□□ -2.15
LDB2O43679 SNRPGP8-201ENST00000454064 226 ntBASIC1.65□□□□□ -2.15
LDB2O43679 AC099513.1-201ENST00000490423 301 ntBASIC1.65□□□□□ -2.15
LDB2O43679 CYCTP-201ENST00000504253 315 ntBASIC1.65□□□□□ -2.15
LDB2O43679 RNU6-561P-201ENST00000516222 102 ntBASIC1.65□□□□□ -2.15
LDB2O43679 RNU6-1299P-201ENST00000516316 100 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 192.5 ms