Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC006600.1-201ENST00000572529 153 ntBASIC0.76□□□□□ -2.29
CUX2O14529 Y_RNA.772-201ENST00000606692 102 ntBASIC0.76□□□□□ -2.29
CUX2O14529 SNORD14.1-201ENST00000365609 90 ntBASIC0.75□□□□□ -2.29
CUX2O14529 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
CUX2O14529 RNA5SP266-201ENST00000410273 108 ntBASIC0.75□□□□□ -2.29
CUX2O14529 RNA5SP255-201ENST00000516370 107 ntBASIC0.75□□□□□ -2.29
CUX2O14529 RNU7-43P-201ENST00000516554 64 ntBASIC0.75□□□□□ -2.29
CUX2O14529 SNORD116.3-201ENST00000517176 78 ntBASIC0.75□□□□□ -2.29
CUX2O14529 RN7SKP295-201ENST00000517264 153 ntBASIC0.75□□□□□ -2.29
CUX2O14529 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.75□□□□□ -2.29
CUX2O14529 AC025627.3-201ENST00000582078 182 ntBASIC0.75□□□□□ -2.29
CUX2O14529 RPS29P30-201ENST00000600975 111 ntBASIC0.75□□□□□ -2.29
CUX2O14529 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
CUX2O14529 MIR103A2-201ENST00000362154 78 ntBASIC0.74□□□□□ -2.29
CUX2O14529 Y_RNA.146-201ENST00000363549 102 ntBASIC0.74□□□□□ -2.29
CUX2O14529 Y_RNA.148-201ENST00000363557 117 ntBASIC0.74□□□□□ -2.29
CUX2O14529 RNU6-1323P-201ENST00000384025 107 ntBASIC0.74□□□□□ -2.29
CUX2O14529 MIR15B-201ENST00000385045 98 ntBASIC0.74□□□□□ -2.29
CUX2O14529 RNU6-855P-201ENST00000410395 104 ntBASIC0.74□□□□□ -2.29
CUX2O14529 AC005042.3-201ENST00000453230 174 ntBASIC0.74□□□□□ -2.29
CUX2O14529 U7.7-201ENST00000459276 60 ntBASIC0.74□□□□□ -2.29
CUX2O14529 RNU6-197P-201ENST00000516680 100 ntBASIC0.74□□□□□ -2.29
CUX2O14529 Y_RNA.718-201ENST00000517110 102 ntBASIC0.74□□□□□ -2.29
CUX2O14529 AC023827.1-201ENST00000569247 97 ntBASIC0.74□□□□□ -2.29
CUX2O14529 Y_RNA.187-201ENST00000363918 113 ntBASIC0.73□□□□□ -2.29
CUX2O14529 MTCO2P27-201ENST00000420740 428 ntBASIC0.73□□□□□ -2.29
CUX2O14529 HMGN2P32-201ENST00000444648 269 ntBASIC0.73□□□□□ -2.29
CUX2O14529 AC011373.1-201ENST00000607270 237 ntBASIC0.73□□□□□ -2.29
CUX2O14529 JPX_2.1-201ENST00000614161 69 ntBASIC0.73□□□□□ -2.29
CUX2O14529 AC138305.3-201ENST00000624988 240 ntBASIC0.73□□□□□ -2.29
CUX2O14529 Y_RNA.456-201ENST00000384232 111 ntBASIC0.73□□□□□ -2.29
CUX2O14529 SNORD38C-201ENST00000384381 69 ntBASIC0.73□□□□□ -2.29
CUX2O14529 SNORD89-201ENST00000390981 114 ntBASIC0.73□□□□□ -2.29
CUX2O14529 SNORD123-201ENST00000459473 70 ntBASIC0.73□□□□□ -2.29
CUX2O14529 RNU7-41P-201ENST00000515917 61 ntBASIC0.73□□□□□ -2.29
CUX2O14529 AC109810.1-201ENST00000534066 224 ntBASIC0.73□□□□□ -2.29
CUX2O14529 RBM11P1-201ENST00000604951 799 ntBASIC0.73□□□□□ -2.29
CUX2O14529 AC099654.14-201ENST00000638599 341 ntBASIC0.73□□□□□ -2.29
CUX2O14529 SNORD14E-201ENST00000364009 85 ntBASIC0.72□□□□□ -2.29
CUX2O14529 Y_RNA.462-201ENST00000384268 102 ntBASIC0.72□□□□□ -2.29
CUX2O14529 MIR559-201ENST00000385188 96 ntBASIC0.72□□□□□ -2.29
CUX2O14529 SNORD111-201ENST00000408139 94 ntBASIC0.72□□□□□ -2.29
CUX2O14529 RNU4-77P-201ENST00000516692 156 ntBASIC0.72□□□□□ -2.29
CUX2O14529 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.72□□□□□ -2.29
CUX2O14529 U6.92-201ENST00000636464 89 ntBASIC0.72□□□□□ -2.29
CUX2O14529 Y_RNA.331-201ENST00000365267 102 ntBASIC0.71□□□□□ -2.3
CUX2O14529 RNU6-1040P-201ENST00000383974 107 ntBASIC0.71□□□□□ -2.3
CUX2O14529 RPL23AP54-201ENST00000495129 419 ntBASIC0.71□□□□□ -2.3
CUX2O14529 AC113410.1-201ENST00000505029 247 ntBASIC0.71□□□□□ -2.3
CUX2O14529 RNU6-1007P-201ENST00000516586 107 ntBASIC0.71□□□□□ -2.3
CUX2O14529 SNORA20.3-201ENST00000516880 132 ntBASIC0.71□□□□□ -2.3
CUX2O14529 MIR548AR-201ENST00000582191 57 ntBASIC0.71□□□□□ -2.3
CUX2O14529 AC131055.1-201ENST00000584626 316 ntBASIC0.71□□□□□ -2.3
CUX2O14529 Y_RNA.310-201ENST00000365063 113 ntBASIC0.7□□□□□ -2.3
CUX2O14529 MIR802-201ENST00000390235 94 ntBASIC0.7□□□□□ -2.3
CUX2O14529 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.7□□□□□ -2.3
CUX2O14529 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.7□□□□□ -2.3
CUX2O14529 RNU6-966P-201ENST00000516479 104 ntBASIC0.7□□□□□ -2.3
CUX2O14529 RNU7-110P-201ENST00000516891 62 ntBASIC0.7□□□□□ -2.3
CUX2O14529 MIR2681-201ENST00000581814 105 ntBASIC0.7□□□□□ -2.3
CUX2O14529 UBE2V2P2-201ENST00000587677 504 ntBASIC0.7□□□□□ -2.3
CUX2O14529 AC010205.1-201ENST00000616668 449 ntBASIC0.7□□□□□ -2.3
CUX2O14529 AC023934.1-201ENST00000574529 2389 ntBASIC0.7□□□□□ -2.3
CUX2O14529 RNA5SP98-201ENST00000363158 137 ntBASIC0.69□□□□□ -2.3
CUX2O14529 SNORD113.3-201ENST00000364630 78 ntBASIC0.69□□□□□ -2.3
CUX2O14529 U8.7-201ENST00000364940 136 ntBASIC0.69□□□□□ -2.3
CUX2O14529 MIR1185-1-201ENST00000408598 86 ntBASIC0.69□□□□□ -2.3
CUX2O14529 SNRPGP12-201ENST00000449481 213 ntBASIC0.69□□□□□ -2.3
CUX2O14529 Y_RNA.661-201ENST00000516003 99 ntBASIC0.69□□□□□ -2.3
CUX2O14529 AP003716.2-201ENST00000528260 108 ntBASIC0.69□□□□□ -2.3
CUX2O14529 AC093027.1-201ENST00000546698 429 ntBASIC0.69□□□□□ -2.3
CUX2O14529 AL136317.1-201ENST00000612653 226 ntBASIC0.69□□□□□ -2.3
CUX2O14529 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.69□□□□□ -2.3
CUX2O14529 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.69□□□□□ -2.3
CUX2O14529 Y_RNA.203-201ENST00000364106 102 ntBASIC0.68□□□□□ -2.3
CUX2O14529 RNU6-442P-201ENST00000383968 104 ntBASIC0.68□□□□□ -2.3
CUX2O14529 Y_RNA.463-201ENST00000384271 102 ntBASIC0.68□□□□□ -2.3
CUX2O14529 Y_RNA.505-201ENST00000384489 102 ntBASIC0.68□□□□□ -2.3
CUX2O14529 Y_RNA.570-201ENST00000384750 101 ntBASIC0.68□□□□□ -2.3
CUX2O14529 RNY4P36-201ENST00000391116 96 ntBASIC0.68□□□□□ -2.3
CUX2O14529 AC067940.1-201ENST00000458411 300 ntBASIC0.68□□□□□ -2.3
CUX2O14529 AC092447.9-201ENST00000603395 144 ntBASIC0.68□□□□□ -2.3
CUX2O14529 AP003357.1-201ENST00000604497 148 ntBASIC0.68□□□□□ -2.3
CUX2O14529 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.68□□□□□ -2.3
CUX2O14529 RNU6-923P-201ENST00000364753 107 ntBASIC0.67□□□□□ -2.3
CUX2O14529 Y_RNA.439-201ENST00000384119 94 ntBASIC0.67□□□□□ -2.3
CUX2O14529 RNU6-110P-201ENST00000384508 104 ntBASIC0.67□□□□□ -2.3
CUX2O14529 RNU6-277P-201ENST00000516272 106 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AC024405.2-202ENST00000532731 184 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AC104465.1-201ENST00000611365 139 ntBASIC0.67□□□□□ -2.3
CUX2O14529 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.67□□□□□ -2.3
CUX2O14529 7SK.10-201ENST00000621414 298 ntBASIC0.67□□□□□ -2.3
CUX2O14529 SNORD116-29-201ENST00000384516 83 ntBASIC0.67□□□□□ -2.3
CUX2O14529 Y_RNA.572-201ENST00000384757 98 ntBASIC0.67□□□□□ -2.3
CUX2O14529 MIR605-201ENST00000385078 83 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AL035398.1-201ENST00000430869 322 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AC236972.2-201ENST00000434979 310 ntBASIC0.67□□□□□ -2.3
CUX2O14529 U8.20-201ENST00000459445 131 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AC091951.2-201ENST00000500762 203 ntBASIC0.67□□□□□ -2.3
CUX2O14529 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms