Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU6-1125P-201ENST00000363601 107 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU6-743P-201ENST00000364151 106 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 Y_RNA.253-201ENST00000364562 112 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 Y_RNA.290-201ENST00000364879 114 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU6-816P-201ENST00000390914 107 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU6-1268P-201ENST00000391214 107 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU6-1239P-201ENST00000391310 107 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU7-164P-201ENST00000459221 62 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNA5SP57-201ENST00000459463 123 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RN7SL636P-201ENST00000497504 294 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 RNU7-70P-201ENST00000516941 66 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 AC091544.4-201ENST00000555268 342 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 MIR4765-201ENST00000585007 77 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 AC008507.4-201ENST00000585464 127 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 FAM71BP1-201ENST00000604431 523 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 uc_338.14-201ENST00000613162 166 ntBASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.46□□□□□ -2.01
C1QTNF3-AMACRE9PGA6 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU4-36P-201ENST00000364294 144 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 Y_RNA.244-201ENST00000364484 109 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 Y_RNA.466-201ENST00000384294 113 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 HMGN2P34-201ENST00000437647 269 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 HMGN2P18-201ENST00000450680 270 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU7-61P-201ENST00000515897 61 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU7-123P-201ENST00000515911 60 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 SCARNA23-201ENST00000516060 130 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 SNORD53-201ENST00000579969 78 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 UCA1.1-201ENST00000620952 75 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AL162726.3-218ENST00000636401 95 ntBASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.46□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6-349P-201ENST00000362402 107 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 Y_RNA.267-201ENST00000364679 109 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR520G-201ENST00000385064 90 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR802-201ENST00000390235 94 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU4-53P-201ENST00000410828 140 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 TRBV12-1-201ENST00000479785 344 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU7-6P-201ENST00000516845 62 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC064859.1-201ENST00000624741 174 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR3202-2-201ENST00000635980 79 ntBASIC2.45□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR126-201ENST00000362291 85 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNA5SP289-201ENST00000362332 137 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR767-201ENST00000390228 109 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC009238.1-201ENST00000442165 424 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC009237.6-201ENST00000446969 424 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6-795P-201ENST00000516323 103 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNA5SP490-201ENST00000517141 136 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC004486.1-201ENST00000546846 233 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR3163-201ENST00000581592 73 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR1291-201ENST00000627649 87 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR1248-201ENST00000629190 106 ntBASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 SNORD114-30-201ENST00000364448 72 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6-1276P-201ENST00000365372 104 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6-1189P-201ENST00000383958 107 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6-242P-201ENST00000384359 107 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 Y_RNA.531-201ENST00000384589 121 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6-644P-201ENST00000391155 98 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR548O-201ENST00000408583 114 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU6-826P-201ENST00000516827 104 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR4446-201ENST00000578505 67 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 MIR3945-201ENST00000581853 98 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 HSPE1P19-201ENST00000603327 295 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AL513534.2-201ENST00000603836 250 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC103810.6-201ENST00000606708 136 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 FO624990.1-201ENST00000636373 85 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC009487.4-201ENST00000624969 3585 ntBASIC2.43□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.42□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC016717.2-201ENST00000609089 5141 ntBASIC2.42□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU4-16P-201ENST00000364737 141 ntBASIC2.42□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNU1-133P-201ENST00000364867 167 ntBASIC2.42□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 RNY1P6-201ENST00000384193 109 ntBASIC2.42□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.42□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.42□□□□□ -2.02
C1QTNF3-AMACRE9PGA6 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms