Protein–RNA interactions for Protein: B0FP48

UPK3BL1, Uroplakin-3b-like protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BL1B0FP48 RNA5SP109-201ENST00000391010 116 ntBASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 HMGN2P39-201ENST00000398005 273 ntBASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 RNU6-781P-201ENST00000516377 101 ntBASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 MIR4635-201ENST00000583759 79 ntBASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 AC108081.1-201ENST00000604358 221 ntBASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 AC025166.1-201ENST00000612411 163 ntBASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
UPK3BL1B0FP48 VTRNA1-1-201ENST00000363120 99 ntBASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 SNORD115-28-201ENST00000363931 81 ntBASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 RNU6-1189P-201ENST00000383958 107 ntBASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 MIR548A3-201ENST00000385297 97 ntBASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 RNA5SP282-201ENST00000516355 108 ntBASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 IGKV3-31-201ENST00000523109 329 ntBASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 AC027279.3-201ENST00000625055 122 ntBASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
UPK3BL1B0FP48 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
UPK3BL1B0FP48 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
UPK3BL1B0FP48 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
UPK3BL1B0FP48 Y_RNA.547-201ENST00000384654 119 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 RNA5SP136-201ENST00000410906 107 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 AC007064.1-201ENST00000412238 351 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 RPS26P48-201ENST00000491713 339 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 SNORD33.1-201ENST00000516213 88 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 AC004486.1-201ENST00000546846 233 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 AC078899.2-201ENST00000595282 212 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
UPK3BL1B0FP48 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 Y_RNA.37-201ENST00000362606 108 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 RNU1-51P-201ENST00000365345 176 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 MIR597-201ENST00000384968 97 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 RN7SKP200-201ENST00000410564 320 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 AC063976.4-201ENST00000421971 163 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 AC087499.4-201ENST00000448505 178 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 AC092185.1-201ENST00000491371 97 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 IGKV1-22-201ENST00000524313 326 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 MIR4529-201ENST00000578110 78 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 MIR5094-201ENST00000578766 85 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 U1.36-201ENST00000620684 176 ntBASIC2.64□□□□□ -1.99
UPK3BL1B0FP48 SNORD116-21-201ENST00000384507 92 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 MIR1283-2-201ENST00000408621 87 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 RNA5SP425-201ENST00000410336 112 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 CYCTP-201ENST00000504253 315 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 RNU7-25P-201ENST00000516544 62 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 DEFB122-202ENST00000569013 197 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 AL121890.5-201ENST00000620848 304 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 MIR6733-201ENST00000635723 61 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 MIR376A2-201ENST00000636782 80 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 MTND5P18-201ENST00000445624 1801 ntBASIC2.63□□□□□ -1.99
UPK3BL1B0FP48 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 MIRLET7C-201ENST00000362160 84 ntBASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 SNORA63D-201ENST00000364359 132 ntBASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 SNORA2.2-201ENST00000365473 135 ntBASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 SNORA48.1-201ENST00000390879 135 ntBASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 SNORD88.1-201ENST00000408684 91 ntBASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 AL445646.1-201ENST00000431784 216 ntBASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 Y_RNA.649-201ENST00000459077 103 ntBASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
UPK3BL1B0FP48 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 SNORA22-201ENST00000383907 134 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 RNU1-52P-201ENST00000384190 164 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 HMGN2P3-201ENST00000433603 273 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 HMGN2P5-201ENST00000436882 273 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 STAG3L5P-204ENST00000443759 179 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 RNU6-830P-201ENST00000516353 107 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 SNORA31.10-201ENST00000516482 106 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 MIR4648-201ENST00000580107 72 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 SNORD14A-201ENST00000606526 91 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 AL137067.1-201ENST00000615933 120 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 ZNF720P1-201ENST00000562403 1939 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 AL442644.1-201ENST00000454390 3105 ntBASIC2.61□□□□□ -1.99
UPK3BL1B0FP48 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 SNORD38C-201ENST00000384381 69 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 RNU6-163P-201ENST00000384396 106 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 AL034345.1-201ENST00000407768 123 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 RNU4-53P-201ENST00000410828 140 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 RNU6-938P-201ENST00000411285 103 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 Z98742.3-201ENST00000418637 326 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 AC114811.1-201ENST00000507207 168 ntBASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.6□□□□□ -1.99
UPK3BL1B0FP48 Y_RNA.440-201ENST00000384120 114 ntBASIC2.59□□□□□ -1.99
UPK3BL1B0FP48 RNU6-880P-201ENST00000384526 107 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms