Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MIR8063-201ENST00000621930 81 ntBASIC1.84□□□□□ -2.11
MBD3L4A6NDZ8 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
MBD3L4A6NDZ8 MIRLET7G-201ENST00000362280 84 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.140-201ENST00000363474 103 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-833P-201ENST00000363486 107 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-1138P-201ENST00000365359 106 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 RNA5SP259-201ENST00000365541 109 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.412-201ENST00000384001 104 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.432-201ENST00000384087 111 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 RNU7-120P-201ENST00000459334 63 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-1219P-201ENST00000516143 112 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-1299P-201ENST00000516316 100 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 AC106754.2-201ENST00000623006 233 ntBASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
MBD3L4A6NDZ8 SNORD45.3-201ENST00000363836 72 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-275P-201ENST00000364910 107 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.336-201ENST00000365307 109 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.338-201ENST00000365320 114 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 MIR15B-201ENST00000385045 98 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 SNORA26.9-201ENST00000391322 122 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 SNORA79-201ENST00000408376 140 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 RNU2-70P-201ENST00000410718 179 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 RN7SKP51-201ENST00000410781 304 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 AC005908.1-201ENST00000468701 347 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 U6.106-201ENST00000636360 105 ntBASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
MBD3L4A6NDZ8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.75-201ENST00000362927 97 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-907P-201ENST00000390924 102 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 RNA5SP489-201ENST00000410986 109 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 RNA5SP247-201ENST00000411181 105 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 AL161935.2-201ENST00000414627 60 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 snoU13.9-201ENST00000458927 103 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-561P-201ENST00000516222 102 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-126P-201ENST00000516685 103 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-861P-201ENST00000516745 106 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 SNORA77B-201ENST00000578179 125 ntBASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-199P-201ENST00000362954 107 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 MIR452-201ENST00000385020 85 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 SNORA26-201ENST00000391286 122 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 RNU2-55P-201ENST00000411146 174 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 AC104435.1-201ENST00000483483 166 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 MIR5002-201ENST00000584713 97 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 AL137847.3-201ENST00000611521 109 ntBASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.8□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.164-201ENST00000363709 102 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-484P-201ENST00000384016 107 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 AC019129.1-201ENST00000403786 261 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 SNRPGP8-201ENST00000454064 226 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-365P-201ENST00000517113 106 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 MIR3198-2-201ENST00000577868 80 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 AP000942.3-201ENST00000603702 160 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 MIR6845-201ENST00000613182 61 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.783-201ENST00000613546 102 ntBASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
MBD3L4A6NDZ8 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 RNU1-17P-201ENST00000363022 152 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 RNU6-457P-201ENST00000363999 107 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.270-201ENST00000364693 104 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 SNORD38C-201ENST00000384381 69 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 MIR516B2-201ENST00000385190 85 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 RNU2-64P-201ENST00000411315 191 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 CYCSP49-201ENST00000420810 319 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 Y_RNA.662-201ENST00000516028 97 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 MRPS18CP4-201ENST00000535821 231 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 AC015726.2-201ENST00000620112 122 ntBASIC1.78□□□□□ -2.12
MBD3L4A6NDZ8 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.4-201ENST00000362333 112 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-682P-201ENST00000363843 106 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-268P-201ENST00000364174 107 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 MIR583-201ENST00000384846 75 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 AC015922.2-201ENST00000435593 184 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 AC079804.2-201ENST00000490376 200 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-197P-201ENST00000516680 100 ntBASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
MBD3L4A6NDZ8 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.23-201ENST00000362496 106 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 RNU6-643P-201ENST00000384018 107 ntBASIC1.76□□□□□ -2.13
MBD3L4A6NDZ8 AC006461.1-201ENST00000412637 326 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms