Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 Y_RNA.13-201ENST00000362403 112 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-1309P-201ENST00000363305 108 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-1048P-201ENST00000364054 107 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 SNORA69-201ENST00000383895 132 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 SNORA75.1-201ENST00000391130 148 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 RNA5SP118-201ENST00000410385 109 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-735P-201ENST00000410612 107 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 AL138752.1-201ENST00000452964 351 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 snoU13.11-201ENST00000459219 104 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 AC083904.1-201ENST00000487828 231 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-958P-201ENST00000516995 106 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 MIR4273-201ENST00000582824 84 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 U7.6-201ENST00000610841 64 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 JPX_2.1-201ENST00000614161 69 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 AL391099.1-201ENST00000624635 187 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 Z97988.1-201ENST00000637697 135 ntBASIC-0.8□□□□□ -2.54
TRAV5A0A0B4J249 FGF7P2-201ENST00000332473 296 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-403P-201ENST00000363163 104 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-811P-201ENST00000384069 107 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 RNY3P10-201ENST00000384764 102 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 MTCO3P40-201ENST00000392516 676 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 SNORA40.9-201ENST00000515895 93 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-138P-201ENST00000515952 107 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 AP001328.1-201ENST00000528550 176 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 AC138749.4-201ENST00000563970 127 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 MIR4677-201ENST00000584153 80 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 POLR3GP1-201ENST00000594073 261 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 MIR8055-201ENST00000610739 97 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 AF246928.1-201ENST00000623768 87 ntBASIC-0.81□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-480P-201ENST00000384332 107 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 Y_RNA.477-201ENST00000384352 108 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 AL031003.1-201ENST00000404229 172 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 AL353193.1-201ENST00000421444 268 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 RPL39P25-201ENST00000449384 154 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 HAR1A.1-201ENST00000459583 118 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 AC114755.3-201ENST00000481111 251 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 RNA5SP67-201ENST00000516422 131 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 LRRC34P1-201ENST00000542742 915 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 AC124303.1-201ENST00000605703 360 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 AL590491.3-201ENST00000610731 82 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 SNORA70.25-201ENST00000612741 95 ntBASIC-0.82□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-254P-201ENST00000363377 107 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-595P-201ENST00000363944 107 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 SNORA72.3-201ENST00000365074 132 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 RNU7-87P-201ENST00000459343 62 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 MRPS36P3-201ENST00000519284 130 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 MIR378D2-201ENST00000580636 98 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 MIR4432-201ENST00000581823 84 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 ZNF299P-201ENST00000406845 1804 ntBASIC-0.83□□□□□ -2.54
TRAV5A0A0B4J249 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 SNORD12C-201ENST00000386307 89 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-913P-201ENST00000390913 95 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 MIR876-201ENST00000401147 81 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 RNU7-125P-201ENST00000458760 62 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-765P-201ENST00000516916 99 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 AC060788.1-201ENST00000521318 469 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 IGKV1-22-201ENST00000524313 326 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 AL133255.1-201ENST00000606374 441 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 AC109347.2-201ENST00000610220 349 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 AC004467.1-201ENST00000615678 330 ntBASIC-0.84□□□□□ -2.54
TRAV5A0A0B4J249 RNU6-1252P-201ENST00000363054 104 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-192P-201ENST00000391253 100 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-602P-201ENST00000411155 105 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 MTND1P27-201ENST00000451117 902 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 MTND3P16-201ENST00000452205 344 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-759P-201ENST00000516740 103 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 AC008507.4-201ENST00000585464 127 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 AC006441.5-201ENST00000612680 209 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 MIR6082-201ENST00000613604 109 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 AL162376.1-201ENST00000624117 175 ntBASIC-0.85□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 SNORD114-11-201ENST00000363738 75 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 RNU4-84P-201ENST00000364200 139 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 Y_RNA.241-201ENST00000364470 117 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-291P-201ENST00000384720 107 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 AC244250.2-201ENST00000418731 148 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 MTCO2P19-201ENST00000427513 598 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 CHEK2P4-201ENST00000450340 246 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 RNU7-73P-201ENST00000458743 63 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-232P-201ENST00000517144 64 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 MTCO2P4-201ENST00000517968 247 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 AC010205.1-201ENST00000616668 449 ntBASIC-0.86□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-553P-201ENST00000364047 96 ntBASIC-0.87□□□□□ -2.55
TRAV5A0A0B4J249 SNORA25.7-201ENST00000364375 127 ntBASIC-0.87□□□□□ -2.55
TRAV5A0A0B4J249 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.87□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-306P-201ENST00000384617 107 ntBASIC-0.87□□□□□ -2.55
TRAV5A0A0B4J249 Y_RNA.536-201ENST00000384621 113 ntBASIC-0.87□□□□□ -2.55
TRAV5A0A0B4J249 RNU6-535P-201ENST00000384722 107 ntBASIC-0.87□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms