Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 RNU2-60P-201ENST00000517290 128 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.09□□□□□ -2.07
CCDC187A0A096LP49 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.09□□□□□ -2.08
CCDC187A0A096LP49 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 AC005336.3-201ENST00000623833 2679 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 MTND5P32-201ENST00000560711 1802 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 RNU6-235P-201ENST00000362644 107 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 SNORA33-201ENST00000363664 130 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.622-201ENST00000411091 108 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 HSPE1P21-201ENST00000438283 308 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 HMGN2P23-201ENST00000456759 269 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 RNU6-197P-201ENST00000516680 100 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 RNU6-63P-201ENST00000516690 95 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 AC097639.2-201ENST00000603159 172 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 AC069114.2-201ENST00000604699 304 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 MIR6840-201ENST00000611937 71 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 AC009831.4-201ENST00000620744 325 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 U6.108-201ENST00000637764 58 ntBASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
CCDC187A0A096LP49 AL596028.1-201ENST00000326971 197 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 U8.1-201ENST00000362843 134 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 RNU6-147P-201ENST00000383983 107 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 SNORA8-201ENST00000384574 139 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 MIR17-201ENST00000385012 84 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 SNORA48.1-201ENST00000390879 135 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 RNA5SP496-201ENST00000391240 109 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 RNA5SP511-201ENST00000410487 115 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.630-201ENST00000411370 108 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 AL158147.1-201ENST00000443970 75 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 RNU6-437P-201ENST00000459408 95 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 RPS26P45-201ENST00000471748 340 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 AC015720.1-201ENST00000565251 277 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 MIR4287-201ENST00000579398 78 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 MIR3121-201ENST00000579680 77 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 POLR3GP1-201ENST00000594073 261 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 AC073413.2-201ENST00000604332 360 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 AC005972.2-201ENST00000604690 348 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 U1.36-201ENST00000620684 176 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 MIR4679-1-201ENST00000637619 75 ntBASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.07□□□□□ -2.08
CCDC187A0A096LP49 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.120-201ENST00000363304 110 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 RNU4-13P-201ENST00000364019 141 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 MIRLET7F2-201ENST00000385277 83 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.584-201ENST00000391090 114 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 AL023284.1-201ENST00000403956 276 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 RNU2-55P-201ENST00000411146 174 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 AC245047.4-201ENST00000433189 144 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 RNU6-295P-201ENST00000516901 104 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 RNU7-116P-201ENST00000516940 62 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 RNA5SP170-201ENST00000517150 101 ntBASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
CCDC187A0A096LP49 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.587-201ENST00000391210 103 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.617-201ENST00000410920 90 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 RNA5SP501-201ENST00000410990 112 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 RNU7-94P-201ENST00000459576 63 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 AL163195.1-201ENST00000496941 348 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 SNORD33.1-201ENST00000516213 88 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 RNVU1-2-201ENST00000516326 135 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 MIR5094-201ENST00000578766 85 ntBASIC2.05□□□□□ -2.08
CCDC187A0A096LP49 RNA5SP276-201ENST00000362580 94 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 RNU6-508P-201ENST00000363231 103 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 RNU6-1255P-201ENST00000363434 112 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 RNU6-136P-201ENST00000384663 107 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 MIR520G-201ENST00000385064 90 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 SNORA26.9-201ENST00000391322 122 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 AC069257.2-201ENST00000441819 155 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 SNORD77.4-201ENST00000516158 81 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 AC018630.2-201ENST00000534866 2403 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 MIR4679-2-201ENST00000578358 77 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 AC108081.1-201ENST00000604358 221 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 U6.95-201ENST00000636931 70 ntBASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
CCDC187A0A096LP49 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 ZNF355P-201ENST00000427301 3216 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.91-201ENST00000363042 107 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.114-201ENST00000363265 113 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 SNORA22-201ENST00000383907 134 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 Y_RNA.432-201ENST00000384087 111 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 MIR562-201ENST00000384894 95 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 U8.13-201ENST00000390842 128 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 AL603914.1-201ENST00000401964 204 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 MLLT10P1-201ENST00000418346 262 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 AL445646.1-201ENST00000431784 216 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 SNORD11-201ENST00000459124 84 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 RPL23AP54-201ENST00000495129 419 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 AC090142.3-201ENST00000519012 385 ntBASIC2.03□□□□□ -2.08
CCDC187A0A096LP49 AC084364.2-201ENST00000546924 395 ntBASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 119.6 ms