Protein–RNA interactions for Protein: U3KQE9

Uncharacterized protein (Fragment), humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U3KQE9 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
U3KQE9 MIR494-201ENST00000349529 81 ntBASIC2.55□□□□□ -2
U3KQE9 RNU1-58P-201ENST00000362413 163 ntBASIC2.55□□□□□ -2
U3KQE9 Y_RNA.17-201ENST00000362433 111 ntBASIC2.55□□□□□ -2
U3KQE9 SNORA73.2-201ENST00000364946 201 ntBASIC2.55□□□□□ -2
U3KQE9 RNU6-573P-201ENST00000383938 106 ntBASIC2.55□□□□□ -2
U3KQE9 AL451046.2-201ENST00000403074 277 ntBASIC2.55□□□□□ -2
U3KQE9 Y_RNA.593-201ENST00000410292 98 ntBASIC2.55□□□□□ -2
U3KQE9 RNU6-592P-201ENST00000411333 103 ntBASIC2.55□□□□□ -2
U3KQE9 MRPL35P3-201ENST00000421557 364 ntBASIC2.55□□□□□ -2
U3KQE9 AL512326.2-201ENST00000426359 151 ntBASIC2.55□□□□□ -2
U3KQE9 RNU7-113P-201ENST00000459273 62 ntBASIC2.55□□□□□ -2
U3KQE9 RN7SL442P-201ENST00000473804 320 ntBASIC2.55□□□□□ -2
U3KQE9 UBL5P3-201ENST00000475112 231 ntBASIC2.55□□□□□ -2
U3KQE9 AC104027.1-201ENST00000521887 300 ntBASIC2.55□□□□□ -2
U3KQE9 MIR7153-201ENST00000637758 57 ntBASIC2.55□□□□□ -2
U3KQE9 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
U3KQE9 AC092881.1-201ENST00000638218 2733 ntBASIC2.55□□□□□ -2
U3KQE9 MIR218-2-201ENST00000385006 110 ntBASIC2.54□□□□□ -2
U3KQE9 MIR452-201ENST00000385020 85 ntBASIC2.54□□□□□ -2
U3KQE9 AL135938.1-201ENST00000443141 297 ntBASIC2.54□□□□□ -2
U3KQE9 RNU2-11P-201ENST00000459191 187 ntBASIC2.54□□□□□ -2
U3KQE9 RN7SL542P-201ENST00000467147 294 ntBASIC2.54□□□□□ -2
U3KQE9 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.54□□□□□ -2
U3KQE9 RNU7-61P-201ENST00000515897 61 ntBASIC2.54□□□□□ -2
U3KQE9 MIR4439-201ENST00000583746 80 ntBASIC2.54□□□□□ -2
U3KQE9 uc_338.1-201ENST00000612113 180 ntBASIC2.54□□□□□ -2
U3KQE9 AC022513.1-201ENST00000624512 117 ntBASIC2.54□□□□□ -2
U3KQE9 AC095038.3-201ENST00000634439 195 ntBASIC2.54□□□□□ -2
U3KQE9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.54□□□□□ -2
U3KQE9 MAPK10-266ENST00000641066 6555 ntBASIC2.54□□□□□ -2
U3KQE9 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.54□□□□□ -2
U3KQE9 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.54□□□□□ -2
U3KQE9 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
U3KQE9 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
U3KQE9 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
U3KQE9 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.54□□□□□ -2
U3KQE9 AC093908.1-201ENST00000623125 8092 ntBASIC2.54□□□□□ -2
U3KQE9 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
U3KQE9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
U3KQE9 Y_RNA.430-201ENST00000384081 110 ntBASIC2.53□□□□□ -2
U3KQE9 MIR554-201ENST00000384874 96 ntBASIC2.53□□□□□ -2
U3KQE9 AL445687.1-201ENST00000439946 251 ntBASIC2.53□□□□□ -2
U3KQE9 snoU13.22-201ENST00000459428 104 ntBASIC2.53□□□□□ -2
U3KQE9 RNU1-45P-201ENST00000517191 141 ntBASIC2.53□□□□□ -2
U3KQE9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.53□□□□□ -2
U3KQE9 DNAJC19P9-201ENST00000555084 351 ntBASIC2.53□□□□□ -2
U3KQE9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.53□□□□□ -2
U3KQE9 MIR3922-201ENST00000585192 84 ntBASIC2.53□□□□□ -2
U3KQE9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.53□□□□□ -2
U3KQE9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.53□□□□□ -2
U3KQE9 MIR1255B1-201ENST00000636325 63 ntBASIC2.53□□□□□ -2
U3KQE9 MIR6841-201ENST00000637129 72 ntBASIC2.53□□□□□ -2
U3KQE9 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
U3KQE9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
U3KQE9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
U3KQE9 RNU1-70P-201ENST00000362618 164 ntBASIC2.52□□□□□ -2.01
U3KQE9 RNA5SP383-201ENST00000362934 120 ntBASIC2.52□□□□□ -2.01
U3KQE9 RNU6-805P-201ENST00000365643 106 ntBASIC2.52□□□□□ -2.01
U3KQE9 RNA5SP229-201ENST00000410809 99 ntBASIC2.52□□□□□ -2.01
U3KQE9 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.52□□□□□ -2.01
U3KQE9 CST9LP2-201ENST00000437612 320 ntBASIC2.52□□□□□ -2.01
U3KQE9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.52□□□□□ -2.01
U3KQE9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.52□□□□□ -2.01
U3KQE9 RNA5SP57-201ENST00000459463 123 ntBASIC2.52□□□□□ -2.01
U3KQE9 SNORA31.4-201ENST00000516049 129 ntBASIC2.52□□□□□ -2.01
U3KQE9 SNORA64.4-201ENST00000516632 81 ntBASIC2.52□□□□□ -2.01
U3KQE9 Y_RNA.773-201ENST00000607168 90 ntBASIC2.52□□□□□ -2.01
U3KQE9 U7.3-201ENST00000616123 62 ntBASIC2.52□□□□□ -2.01
U3KQE9 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC2.52□□□□□ -2.01
U3KQE9 AC007336.1-201ENST00000576365 3828 ntBASIC2.52□□□□□ -2.01
U3KQE9 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
U3KQE9 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
U3KQE9 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
U3KQE9 RNA5SP119-201ENST00000362715 117 ntBASIC2.51□□□□□ -2.01
U3KQE9 RNY1P10-201ENST00000363268 113 ntBASIC2.51□□□□□ -2.01
U3KQE9 RNU6-60P-201ENST00000364792 103 ntBASIC2.51□□□□□ -2.01
U3KQE9 SNORA24-201ENST00000384096 131 ntBASIC2.51□□□□□ -2.01
U3KQE9 RNU6-675P-201ENST00000384236 104 ntBASIC2.51□□□□□ -2.01
U3KQE9 RNU6-242P-201ENST00000384359 107 ntBASIC2.51□□□□□ -2.01
U3KQE9 RNA5SP293-201ENST00000410527 113 ntBASIC2.51□□□□□ -2.01
U3KQE9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC2.51□□□□□ -2.01
U3KQE9 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC2.51□□□□□ -2.01
U3KQE9 SNORA31.10-201ENST00000516482 106 ntBASIC2.51□□□□□ -2.01
U3KQE9 Y_RNA.705-201ENST00000516862 110 ntBASIC2.51□□□□□ -2.01
U3KQE9 SCARNA20.6-201ENST00000517251 106 ntBASIC2.51□□□□□ -2.01
U3KQE9 AC096720.1-201ENST00000604441 183 ntBASIC2.51□□□□□ -2.01
U3KQE9 AC019176.2-201ENST00000611579 315 ntBASIC2.51□□□□□ -2.01
U3KQE9 IGLL4P-201ENST00000614590 133 ntBASIC2.51□□□□□ -2.01
U3KQE9 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.51□□□□□ -2.01
U3KQE9 SNORA22.1-201ENST00000362701 134 ntBASIC2.5□□□□□ -2.01
U3KQE9 SNORD56.3-201ENST00000363507 71 ntBASIC2.5□□□□□ -2.01
U3KQE9 RNY1P1-201ENST00000364372 112 ntBASIC2.5□□□□□ -2.01
U3KQE9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
U3KQE9 RNU6-644P-201ENST00000391155 98 ntBASIC2.5□□□□□ -2.01
U3KQE9 RNU6-972P-201ENST00000391208 107 ntBASIC2.5□□□□□ -2.01
U3KQE9 RPS29P4-201ENST00000414733 161 ntBASIC2.5□□□□□ -2.01
U3KQE9 RPL32P35-201ENST00000415214 394 ntBASIC2.5□□□□□ -2.01
U3KQE9 RPL23AP63-201ENST00000498752 471 ntBASIC2.5□□□□□ -2.01
U3KQE9 RNU1-143P-201ENST00000516296 146 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms