Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 MIR6766-201ENST00000622641 72 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 VTRNA1-1-201ENST00000363120 99 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 Y_RNA.242-201ENST00000364473 110 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 RNU6-1154P-201ENST00000391001 104 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 MIR1283-2-201ENST00000408621 87 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 AC008267.6-201ENST00000441664 139 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 AL606517.2-201ENST00000442855 241 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 RNU6-313P-201ENST00000516317 112 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 RNU6-504P-201ENST00000516568 104 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 MIR4762-201ENST00000585261 75 ntBASIC2.53□□□□□ -2
PCDHA2Q9Y5H9 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 Y_RNA.218-201ENST00000364218 104 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-1019P-201ENST00000364424 107 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 SNORA22C-201ENST00000384614 134 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 HMGN2P35-201ENST00000412164 270 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 MLLT10P1-201ENST00000418346 262 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 AC245047.3-201ENST00000429428 127 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-1211P-201ENST00000459179 105 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 AC007751.1-201ENST00000529260 376 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 AC084364.2-201ENST00000546924 395 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 AC069114.2-201ENST00000604699 304 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
PCDHA2Q9Y5H9 AC245060.5-201ENST00000610778 3293 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 Y_RNA.71-201ENST00000362892 104 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 U8.5-201ENST00000364528 136 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 MIR597-201ENST00000384968 97 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 RNA5SP109-201ENST00000391010 116 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 UBL5P3-201ENST00000475112 231 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 AC131055.1-201ENST00000584626 316 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 AL365205.2-201ENST00000594586 68 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 U7.2-201ENST00000607576 63 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 AC011603.4-201ENST00000611325 277 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 MIR6873-201ENST00000622788 63 ntBASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-915P-201ENST00000364943 103 ntBASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD24-201ENST00000383884 75 ntBASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 MIR518A2-201ENST00000384966 87 ntBASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 RNU11-3P-201ENST00000391111 133 ntBASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 RNA5SP482-201ENST00000391269 118 ntBASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 RNU7-28P-201ENST00000516759 62 ntBASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.5□□□□□ -2.01
PCDHA2Q9Y5H9 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD68-201ENST00000363214 84 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 Y_RNA.127-201ENST00000363386 109 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD50B-201ENST00000364995 70 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD116-14-201ENST00000383894 92 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD116-17-201ENST00000383929 92 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-80P-201ENST00000384195 107 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD61-201ENST00000384252 73 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD116-15-201ENST00000384445 92 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 SNORD116-19-201ENST00000384729 92 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 MIR221-201ENST00000385135 110 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 MIR624-201ENST00000385217 97 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 RNA5SP465-201ENST00000391195 109 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 HMGN2P39-201ENST00000398005 273 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 MIR5094-201ENST00000578766 85 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 MIR8054-201ENST00000620877 86 ntBASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHA2Q9Y5H9 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-888P-201ENST00000363010 101 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 Y_RNA.120-201ENST00000363304 110 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 MIR504-201ENST00000385065 83 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 HMGN2P3-201ENST00000433603 273 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 HMGN2P5-201ENST00000436882 273 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 AC069257.2-201ENST00000441819 155 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 Y_RNA.666-201ENST00000516187 112 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-1234P-201ENST00000516877 103 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 AC092881.1-201ENST00000638218 2733 ntBASIC2.48□□□□□ -2.01
PCDHA2Q9Y5H9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 U8.1-201ENST00000362843 134 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 RNA5SP205-201ENST00000364653 136 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 Y_RNA.265-201ENST00000364677 108 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-440P-201ENST00000390882 105 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 RNA5SP127-201ENST00000411051 133 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 RNU4-57P-201ENST00000515980 135 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 RNU6-1333P-201ENST00000516162 93 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 SNORA18.4-201ENST00000516440 124 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 AC009831.4-201ENST00000620744 325 ntBASIC2.47□□□□□ -2.01
PCDHA2Q9Y5H9 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.46□□□□□ -2.01
PCDHA2Q9Y5H9 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 SNORD114-1-201ENST00000362705 72 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 RNU6-1290P-201ENST00000362957 109 ntBASIC2.46□□□□□ -2.02
PCDHA2Q9Y5H9 Y_RNA.261-201ENST00000364631 102 ntBASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 148.6 ms