Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 RNU6-1138P-201ENST00000365359 106 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-728P-201ENST00000365375 104 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-424P-201ENST00000384367 105 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-163P-201ENST00000384396 106 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-918P-201ENST00000391219 106 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR1278-201ENST00000408753 81 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 RNA5SP168-201ENST00000516642 112 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 AP002392.1-201ENST00000537692 208 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR4448-201ENST00000584360 86 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 AC120024.3-201ENST00000603167 156 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 AL096840.1-201ENST00000603287 93 ntBASIC2.08□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-833P-201ENST00000363486 107 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORD14E-201ENST00000364009 85 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 snoU2_19.4-201ENST00000364329 80 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 Y_RNA.587-201ENST00000391210 103 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR891A-201ENST00000401237 79 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORA79-201ENST00000408376 140 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR1267-201ENST00000408723 78 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 MTND5P15-201ENST00000434246 349 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 AL603825.1-201ENST00000438481 80 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 Y_RNA.797-201ENST00000515977 94 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR6132-201ENST00000622083 109 ntBASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
PCDHGA9Q9Y5G4 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-442P-201ENST00000383968 104 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU4-52P-201ENST00000384209 138 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR221-201ENST00000385135 110 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR660-201ENST00000385235 97 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 AL606845.1-201ENST00000404881 255 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 AC245047.8-201ENST00000456455 284 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU7-120P-201ENST00000459334 63 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 AC104435.1-201ENST00000483483 166 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU7-12P-201ENST00000516030 62 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORD77.4-201ENST00000516158 81 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 RNA5SP200-201ENST00000516360 103 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORD45.4-201ENST00000516629 73 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-548P-201ENST00000517083 115 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR4308-201ENST00000580634 81 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 AL049861.1-201ENST00000603130 150 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR6766-201ENST00000622641 72 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORD3E-202ENST00000627253 216 ntBASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
PCDHGA9Q9Y5G4 Y_RNA.233-201ENST00000364407 101 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORA64-201ENST00000384674 134 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR30A-201ENST00000385092 71 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORA12.1-201ENST00000390873 148 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 AC004965.1-201ENST00000413033 213 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 CALM2P4-201ENST00000430810 426 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 AC099513.1-201ENST00000490423 301 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-1299P-201ENST00000516316 100 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR3198-2-201ENST00000577868 80 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 AC008507.4-201ENST00000585464 127 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 AC004792.1-201ENST00000614523 137 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 AL353997.5-201ENST00000618886 171 ntBASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
PCDHGA9Q9Y5G4 MIRLET7C-201ENST00000362160 84 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 MIRLET7G-201ENST00000362280 84 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 Y_RNA.75-201ENST00000362927 97 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-312P-201ENST00000364629 107 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 Y_RNA.572-201ENST00000384757 98 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6-578P-201ENST00000390980 103 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 U8.16-201ENST00000391279 133 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU2-2P-201ENST00000410396 191 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU2-64P-201ENST00000411315 191 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 ZNF355P-201ENST00000427301 3216 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 NDUFA4P2-201ENST00000489989 244 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU7-149P-201ENST00000516739 59 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 AL160236.1-201ENST00000556317 195 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 RNU2-4P-201ENST00000606190 192 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 Pinc.1-201ENST00000616452 154 ntBASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
PCDHGA9Q9Y5G4 Y_RNA.182-201ENST00000363880 111 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 SNORD50B-201ENST00000364995 70 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 MIR194-1-201ENST00000384892 85 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 HMGN2P19-201ENST00000425149 265 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 RNA5SP153-201ENST00000516498 76 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 MRPS18CP4-201ENST00000535821 231 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 AC098479.1-201ENST00000609225 154 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 AC009831.4-201ENST00000620744 325 ntBASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.03□□□□□ -2.08
PCDHGA9Q9Y5G4 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
PCDHGA9Q9Y5G4 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
PCDHGA9Q9Y5G4 RNU6-275P-201ENST00000364910 107 ntBASIC2.02□□□□□ -2.09
PCDHGA9Q9Y5G4 Y_RNA.432-201ENST00000384087 111 ntBASIC2.02□□□□□ -2.09
PCDHGA9Q9Y5G4 SNORA48.3-201ENST00000391081 134 ntBASIC2.02□□□□□ -2.09
PCDHGA9Q9Y5G4 HMGN2P23-201ENST00000456759 269 ntBASIC2.02□□□□□ -2.09
PCDHGA9Q9Y5G4 AC114811.1-201ENST00000507207 168 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 283.3 ms