Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC244015.1-201ENST00000622301 99 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 MIR338-201ENST00000636369 67 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 AC245060.5-201ENST00000610778 3293 ntBASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.49□□□□□ -2.01
CTDP1Q9Y5B0 MIRLET7G-201ENST00000362280 84 ntBASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 SNORD114-6-201ENST00000364393 72 ntBASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-160P-201ENST00000384591 107 ntBASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-1154P-201ENST00000391001 104 ntBASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 SNORA75.5-201ENST00000391291 81 ntBASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-588P-201ENST00000410281 105 ntBASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 RNU1-131P-201ENST00000458943 161 ntBASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC2.48□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-597P-201ENST00000365620 102 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 RNU6-484P-201ENST00000384016 107 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 SNORA48.3-201ENST00000391081 134 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 RNA5SP323-201ENST00000391094 133 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 MIR1262-201ENST00000408276 93 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 RNU2-70P-201ENST00000410718 179 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 ATP5J2P3-201ENST00000451550 258 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 RNU7-197P-201ENST00000458836 62 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 SNORD11-201ENST00000459124 84 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 MRPS17P9-201ENST00000511924 393 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 SNORD77.4-201ENST00000516158 81 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 RNU1-142P-201ENST00000516682 145 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 RNU7-128P-201ENST00000517247 62 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 MIR4287-201ENST00000579398 78 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 AC120024.3-201ENST00000603167 156 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 AL353149.1-201ENST00000610667 244 ntBASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.47□□□□□ -2.01
CTDP1Q9Y5B0 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 RNA5SP432-201ENST00000362480 116 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.542-201ENST00000384641 111 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 RPL23AP42-201ENST00000471152 471 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 AC092991.1-201ENST00000477176 376 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-1291P-201ENST00000516591 104 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-971P-201ENST00000516920 106 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 AC090142.3-201ENST00000519012 385 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 AL160236.1-201ENST00000556317 195 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 DEFB122-202ENST00000569013 197 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 AC022202.1-201ENST00000613515 211 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 AL365222.1-201ENST00000614661 98 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 TUG1_4.1-201ENST00000619464 181 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 MIR6079-201ENST00000635807 62 ntBASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.46□□□□□ -2.02
CTDP1Q9Y5B0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 SNORA25.7-201ENST00000364375 127 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.267-201ENST00000364679 109 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 MIR539-201ENST00000365690 78 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 MIR562-201ENST00000384894 95 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-460P-201ENST00000391158 108 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 AL023284.1-201ENST00000403956 276 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 CYCSP49-201ENST00000420810 319 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 AC245047.4-201ENST00000433189 144 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 AC008267.6-201ENST00000441664 139 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-1211P-201ENST00000459179 105 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 AC108210.2-201ENST00000503681 201 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 RNA5SP153-201ENST00000516498 76 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 AC091178.2-201ENST00000584401 117 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 Pinc.1-201ENST00000616452 154 ntBASIC2.45□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-1082P-201ENST00000364574 107 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 SNORA8-201ENST00000384574 139 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 SNORA22C-201ENST00000384614 134 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-1168P-201ENST00000390831 104 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 SNORA26-201ENST00000391286 122 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 AL158823.1-201ENST00000418441 478 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 HMGN2P38-201ENST00000423806 265 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 AL591806.2-201ENST00000433122 173 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 OR9P1P-201ENST00000496431 281 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 RNU7-149P-201ENST00000516739 59 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 MIR4662B-201ENST00000579498 81 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 AC011603.4-201ENST00000611325 277 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 AC018630.2-201ENST00000534866 2403 ntBASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
CTDP1Q9Y5B0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.91-201ENST00000363042 107 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 SNORA33-201ENST00000363664 130 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-978P-201ENST00000364371 103 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 Y_RNA.634-201ENST00000364811 113 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 MIR515-2-201ENST00000384883 83 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 MIR515-1-201ENST00000384884 83 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 snoU13.23-201ENST00000458863 104 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 HMGN1P7-201ENST00000491722 313 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 AC090255.1-201ENST00000495779 349 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 RNU2-56P-201ENST00000516826 190 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 RNU6-341P-201ENST00000516973 96 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 AP001328.1-201ENST00000528550 176 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 U6.108-201ENST00000637764 58 ntBASIC2.43□□□□□ -2.02
CTDP1Q9Y5B0 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms