Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 MIR515-1-201ENST00000384884 83 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 MIR518F-201ENST00000384973 87 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 MIR802-201ENST00000390235 94 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 AL356320.1-201ENST00000429616 163 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 CALM2P4-201ENST00000430810 426 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 AC006254.2-201ENST00000603259 279 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 uc_338.28-201ENST00000612082 187 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 AL137067.1-201ENST00000615933 120 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 MIR4679-1-201ENST00000637619 75 ntBASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.23□□□□□ -1.89
RTCBQ9Y3I0 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 SNORA1B-201ENST00000362535 133 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 SNORD114-6-201ENST00000364393 72 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 Y_RNA.281-201ENST00000364774 94 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 RNA5SP125-201ENST00000364843 120 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 SNORA8-201ENST00000384574 139 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 ATP5J2P3-201ENST00000451550 258 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 AC024995.1-201ENST00000523014 93 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 MIR4506-201ENST00000584693 77 ntBASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
RTCBQ9Y3I0 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 AC008264.2-201ENST00000610193 3731 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 MIR570-201ENST00000384917 97 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 AL117342.1-201ENST00000404861 406 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 MIR1289-2-201ENST00000408360 111 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 RPS29P24-201ENST00000486345 171 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 AC015712.3-201ENST00000559380 164 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 AC007012.1-201ENST00000567192 175 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 DEFB122-202ENST00000569013 197 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 MIR5197-201ENST00000583721 112 ntBASIC3.21□□□□□ -1.9
RTCBQ9Y3I0 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 SNORA33-201ENST00000363664 130 ntBASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 AL359511.1-201ENST00000402970 211 ntBASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 AP004217.1-201ENST00000480579 346 ntBASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 COX6CP6-201ENST00000490840 228 ntBASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 AC234781.5-201ENST00000508429 271 ntBASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 SNORA72.7-201ENST00000516349 94 ntBASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 MIR3616-201ENST00000584070 92 ntBASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.2□□□□□ -1.9
RTCBQ9Y3I0 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 Y_RNA.366-201ENST00000365540 102 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 RNU6-106P-201ENST00000384405 107 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 RNU6-160P-201ENST00000384591 107 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 MIR764-201ENST00000390811 85 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 CST2P1-201ENST00000425770 87 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 AC104332.2-201ENST00000429959 156 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 AL591806.2-201ENST00000433122 173 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 AC134878.1-201ENST00000619901 243 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 MIR376A2-201ENST00000636782 80 ntBASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
RTCBQ9Y3I0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 AGL-204ENST00000370161 6923 ntTSL 5 BASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 SNORD68-201ENST00000363214 84 ntBASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 RNU6-1107P-201ENST00000364817 104 ntBASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 Y_RNA.410-201ENST00000383992 113 ntBASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 MIR548O-201ENST00000408583 114 ntBASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 RN7SKP123-201ENST00000410732 291 ntBASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 RPS26P48-201ENST00000491713 339 ntBASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 AC006441.5-201ENST00000612680 209 ntBASIC3.18□□□□□ -1.9
RTCBQ9Y3I0 AP006437.1-201ENST00000641440 3685 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 SNORD14E-201ENST00000364009 85 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 RNU6-461P-201ENST00000364195 107 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 RNU6-442P-201ENST00000383968 104 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 RNU6-443P-201ENST00000384780 107 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 SNORD12C-201ENST00000386307 89 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 AL163195.1-201ENST00000496941 348 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 AC108210.2-201ENST00000503681 201 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 Y_RNA.677-201ENST00000516401 85 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 AC007536.1-201ENST00000533382 349 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 MIR1273D-201ENST00000577266 86 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 MIR4762-201ENST00000585261 75 ntBASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
RTCBQ9Y3I0 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 Y_RNA.85-201ENST00000363014 111 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 RNU6-1189P-201ENST00000383958 107 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 MIR181B1-201ENST00000385240 110 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 SNORA26.7-201ENST00000391288 122 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 RNU6-554P-201ENST00000410466 106 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 AC009238.1-201ENST00000442165 424 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 AC009237.6-201ENST00000446969 424 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 AC004486.1-201ENST00000546846 233 ntBASIC3.16□□□□□ -1.9
RTCBQ9Y3I0 MIR5582-201ENST00000579697 68 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms