Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 RNU6-414P-201ENST00000363705 104 ntBASIC2.59□□□□□ -1.99
CDK11AQ9UQ88 RNA5SP109-201ENST00000391010 116 ntBASIC2.59□□□□□ -1.99
CDK11AQ9UQ88 RNU6-651P-201ENST00000411040 105 ntBASIC2.59□□□□□ -1.99
CDK11AQ9UQ88 COX6CP14-201ENST00000469580 174 ntBASIC2.59□□□□□ -1.99
CDK11AQ9UQ88 MIR3618-201ENST00000580330 88 ntBASIC2.59□□□□□ -1.99
CDK11AQ9UQ88 MIR5688-201ENST00000580619 83 ntBASIC2.59□□□□□ -1.99
CDK11AQ9UQ88 MIR8070-201ENST00000616510 88 ntBASIC2.59□□□□□ -1.99
CDK11AQ9UQ88 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.58□□□□□ -2
CDK11AQ9UQ88 Y_RNA.76-201ENST00000362931 109 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 RNY1-201ENST00000364228 113 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 RNU6-439P-201ENST00000384188 106 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 RN7SKP200-201ENST00000410564 320 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 RPS27P1-201ENST00000450552 247 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 RNU6-437P-201ENST00000459408 95 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 RNU7-28P-201ENST00000516759 62 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 MIR4285-201ENST00000581001 85 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 MIR2681-201ENST00000581814 105 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 AC012493.3-201ENST00000604494 112 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 SNORA28-201ENST00000606769 126 ntBASIC2.58□□□□□ -2
CDK11AQ9UQ88 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.58□□□□□ -2
CDK11AQ9UQ88 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
CDK11AQ9UQ88 RNU6ATAC23P-201ENST00000408448 123 ntBASIC2.57□□□□□ -2
CDK11AQ9UQ88 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.57□□□□□ -2
CDK11AQ9UQ88 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC2.57□□□□□ -2
CDK11AQ9UQ88 SNORD53B-201ENST00000577887 78 ntBASIC2.57□□□□□ -2
CDK11AQ9UQ88 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
CDK11AQ9UQ88 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.57□□□□□ -2
CDK11AQ9UQ88 MIR126-201ENST00000362291 85 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 RNU6-674P-201ENST00000363831 107 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 Y_RNA.257-201ENST00000364596 102 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 Y_RNA.262-201ENST00000364641 102 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 Y_RNA.304-201ENST00000365011 112 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 RNU6-440P-201ENST00000390882 105 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 FTH1P12-201ENST00000432137 551 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 AL049830.1-201ENST00000468034 425 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC2.56□□□□□ -2
CDK11AQ9UQ88 Y_RNA.802-201ENST00000614892 130 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 MIR8054-201ENST00000620877 86 ntBASIC2.56□□□□□ -2
CDK11AQ9UQ88 MIR367-201ENST00000362299 68 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 RNY4P28-201ENST00000365281 93 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 SNORA8.3-201ENST00000384679 139 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 MIR526A2-201ENST00000390198 65 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 COX6CP10-201ENST00000416832 224 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 AL606517.2-201ENST00000442855 241 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 MIR4724-201ENST00000579485 89 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 AC009779.6-201ENST00000603972 165 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 AC078938.1-201ENST00000620993 318 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 AL365265.1-201ENST00000621045 234 ntBASIC2.55□□□□□ -2
CDK11AQ9UQ88 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
CDK11AQ9UQ88 SNORA1B-201ENST00000362535 133 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 Y_RNA.200-201ENST00000364018 102 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 Y_RNA.203-201ENST00000364106 102 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 Y_RNA.265-201ENST00000364677 108 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 MIR499A-201ENST00000384903 122 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 MIR1267-201ENST00000408723 78 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 MIR1298-201ENST00000408783 112 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 SNORD116-28-201ENST00000516123 91 ntBASIC2.54□□□□□ -2
CDK11AQ9UQ88 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.54□□□□□ -2
CDK11AQ9UQ88 Y_RNA.199-201ENST00000364014 102 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 RNU6-60P-201ENST00000364792 103 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 RNU6-1080P-201ENST00000383982 107 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 RNU6-360P-201ENST00000390944 104 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 RNA5SP482-201ENST00000391269 118 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 AL034345.1-201ENST00000407768 123 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 HSPE1P9-201ENST00000440046 311 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 snoU13.9-201ENST00000458927 103 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 snoU13.27-201ENST00000459278 104 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 Y_RNA.714-201ENST00000517065 90 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 RNA5SP437-201ENST00000517249 129 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 AL929325.1-201ENST00000603096 117 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 AL645939.4-201ENST00000604495 135 ntBASIC2.53□□□□□ -2
CDK11AQ9UQ88 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2.01
CDK11AQ9UQ88 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
CDK11AQ9UQ88 Y_RNA.626-201ENST00000411288 95 ntBASIC2.52□□□□□ -2.01
CDK11AQ9UQ88 MIR4709-201ENST00000577272 72 ntBASIC2.52□□□□□ -2.01
CDK11AQ9UQ88 JPX_2.1-201ENST00000614161 69 ntBASIC2.52□□□□□ -2.01
CDK11AQ9UQ88 Y_RNA.83-201ENST00000363005 113 ntBASIC2.51□□□□□ -2.01
CDK11AQ9UQ88 AC023449.1-201ENST00000454464 154 ntBASIC2.51□□□□□ -2.01
CDK11AQ9UQ88 RNU6-1007P-201ENST00000516586 107 ntBASIC2.51□□□□□ -2.01
CDK11AQ9UQ88 RNU6-794P-201ENST00000517261 64 ntBASIC2.51□□□□□ -2.01
CDK11AQ9UQ88 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.51□□□□□ -2.01
CDK11AQ9UQ88 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 RNU4-41P-201ENST00000364426 143 ntBASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 RNU6-1318P-201ENST00000365389 103 ntBASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 RNA5SP496-201ENST00000391240 109 ntBASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 AC004965.1-201ENST00000413033 213 ntBASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 HMGN1P7-201ENST00000491722 313 ntBASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 AC100767.1-201ENST00000528178 123 ntBASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 AC011921.3-201ENST00000605540 361 ntBASIC2.5□□□□□ -2.01
CDK11AQ9UQ88 RNU1-42P-201ENST00000364033 160 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 SNORA25.9-201ENST00000365087 128 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 MIR626-201ENST00000385032 94 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 JTBP1-201ENST00000441314 247 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 STAG3L5P-204ENST00000443759 179 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 AC009474.2-201ENST00000451383 136 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 RNU7-34P-201ENST00000459394 64 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 AC005908.1-201ENST00000468701 347 ntBASIC2.49□□□□□ -2.01
CDK11AQ9UQ88 SNORA31.10-201ENST00000516482 106 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms