Protein–RNA interactions for Protein: Q9UKI2

CDC42EP3, Cdc42 effector protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3Q9UKI2 MIR3129-201ENST00000581095 76 ntBASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
CDC42EP3Q9UKI2 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 AL442644.1-201ENST00000454390 3105 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.114-201ENST00000363265 113 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-309P-201ENST00000364573 106 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 SNORD18B-201ENST00000365659 72 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 MIR518F-201ENST00000384973 87 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 RNA5SP109-201ENST00000391010 116 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 RN7SKP192-201ENST00000411291 327 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 AC096725.1-201ENST00000514266 313 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-693P-201ENST00000516134 107 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 RNU1-41P-201ENST00000516161 162 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 RNA5SP236-201ENST00000516169 116 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 RNU1-48P-201ENST00000516400 162 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.690-201ENST00000516603 95 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 AC069114.2-201ENST00000604699 304 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 MIR6817-201ENST00000615588 66 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 MIR8054-201ENST00000620877 86 ntBASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDC42EP3Q9UKI2 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-235P-201ENST00000362644 107 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 SNORD68-201ENST00000363214 84 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.525-201ENST00000384570 113 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 SNORD77.3-201ENST00000391113 65 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 AL138827.1-201ENST00000402666 306 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 RNA5SP21-201ENST00000410917 96 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.617-201ENST00000410920 90 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 RPS29P6-201ENST00000438196 145 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-1270P-201ENST00000517128 108 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 AC007318.2-201ENST00000620999 243 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 AC010297.1-201ENST00000623948 149 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 MIR3914-2-201ENST00000637339 95 ntBASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CDC42EP3Q9UKI2 RNA5SP68-201ENST00000363885 119 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 RNU1-91P-201ENST00000364746 163 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.336-201ENST00000365307 109 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-440P-201ENST00000390882 105 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 SNORA31.10-201ENST00000516482 106 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 SCARNA15-202ENST00000516881 127 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CDC42EP3Q9UKI2 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-508P-201ENST00000363231 103 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 RNA5SP393-201ENST00000363423 117 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-268P-201ENST00000364174 107 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 SNORA63D-201ENST00000364359 132 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 snoU2-30.1-201ENST00000365012 70 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-442P-201ENST00000383968 104 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 MIR518A2-201ENST00000384966 87 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 RNA5SP465-201ENST00000391195 109 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 AF228730.3-201ENST00000436691 102 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 MTATP6P21-201ENST00000440681 189 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 AC069257.2-201ENST00000441819 155 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 Y_RNA.651-201ENST00000459380 103 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 RNU6-772P-201ENST00000516042 105 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 SNORD45.4-201ENST00000516629 73 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 MIR4658-201ENST00000584344 65 ntBASIC2.28□□□□□ -2.04
CDC42EP3Q9UKI2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 MIRLET7C-201ENST00000362160 84 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 SNORD14E-201ENST00000364009 85 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 SNORA25.6-201ENST00000364121 118 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 RNU6-647P-201ENST00000364243 107 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 MIR597-201ENST00000384968 97 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 SNORA40.5-201ENST00000391061 128 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 RNU11-3P-201ENST00000391111 133 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 HMGN2P39-201ENST00000398005 273 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 snoU13.15-201ENST00000459407 104 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 RNU6-919P-201ENST00000516731 104 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 MIR5094-201ENST00000578766 85 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 AL049779.4-201ENST00000604500 156 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 SNORA28-201ENST00000606769 126 ntBASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.27□□□□□ -2.05
CDC42EP3Q9UKI2 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
CDC42EP3Q9UKI2 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDC42EP3Q9UKI2 MTND5P32-201ENST00000560711 1802 ntBASIC2.26□□□□□ -2.05
CDC42EP3Q9UKI2 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
CDC42EP3Q9UKI2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.26□□□□□ -2.05
CDC42EP3Q9UKI2 RNU6-1325P-201ENST00000364905 105 ntBASIC2.26□□□□□ -2.05
CDC42EP3Q9UKI2 Y_RNA.410-201ENST00000383992 113 ntBASIC2.26□□□□□ -2.05
CDC42EP3Q9UKI2 RNU6-1056P-201ENST00000383996 107 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 234.8 ms