Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 RNU2-56P-201ENST00000516826 190 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 SNORA31.17-201ENST00000516953 127 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.68□□□□□ -2.14
SIX4Q9UIU6 AP002004.2-201ENST00000531656 154 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 MIR3122-201ENST00000577243 73 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 MIR4724-201ENST00000579485 89 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.68□□□□□ -2.14
SIX4Q9UIU6 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.68□□□□□ -2.14
SIX4Q9UIU6 AL645939.4-201ENST00000604495 135 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 MIR8054-201ENST00000620877 86 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.68□□□□□ -2.14
SIX4Q9UIU6 RNU6-661P-201ENST00000362409 107 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 snoU2_19.4-201ENST00000364329 80 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 MIR626-201ENST00000385032 94 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 MIR526A2-201ENST00000390198 65 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SIX4Q9UIU6 RNU6-381P-201ENST00000391259 108 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 RNU2-7P-201ENST00000410794 178 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 COX6CP10-201ENST00000416832 224 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 MTND5P15-201ENST00000434246 349 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.67□□□□□ -2.14
SIX4Q9UIU6 RNA5SP57-201ENST00000459463 123 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIX4Q9UIU6 AL591926.4-201ENST00000616895 298 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SIX4Q9UIU6 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SIX4Q9UIU6 WWP1P1-201ENST00000466609 2769 ntBASIC1.67□□□□□ -2.14
SIX4Q9UIU6 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.796-201ENST00000364268 102 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 RNU4-41P-201ENST00000364426 143 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.799-201ENST00000364992 102 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 MIR562-201ENST00000384894 95 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 RNU6-440P-201ENST00000390882 105 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 SNORA67.5-201ENST00000391036 107 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 STAG3L5P-204ENST00000443759 179 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.66□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.644-201ENST00000459006 113 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 AL049830.1-201ENST00000468034 425 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 Y_RNA.674-201ENST00000516362 113 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 AL358944.1-201ENST00000528537 144 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 MIR4713-201ENST00000582691 75 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.66□□□□□ -2.14
SIX4Q9UIU6 BX248123.2-201ENST00000606318 124 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.66□□□□□ -2.14
SIX4Q9UIU6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 RNU6-60P-201ENST00000364792 103 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 RNU6-918P-201ENST00000391219 106 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.65□□□□□ -2.15
SIX4Q9UIU6 SCARNA8-201ENST00000515924 131 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 RNU6-453P-201ENST00000516819 85 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 AC022559.1-201ENST00000520905 205 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.65□□□□□ -2.15
SIX4Q9UIU6 RPL23AP91-201ENST00000569211 455 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 Z83818.1-201ENST00000603584 150 ntBASIC1.65□□□□□ -2.15
SIX4Q9UIU6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SIX4Q9UIU6 RNU6-1020P-201ENST00000363684 107 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 RNU1-42P-201ENST00000364033 160 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.265-201ENST00000364677 108 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 RNA5SP363-201ENST00000365072 115 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.793-201ENST00000411222 111 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 AC009310.1-201ENST00000414414 451 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 AC245047.8-201ENST00000456455 284 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 SNORA81.3-201ENST00000517283 198 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 AC022254.1-201ENST00000567857 235 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 RNU2-4P-201ENST00000606190 192 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 AL021707.8-201ENST00000609428 183 ntBASIC1.64□□□□□ -2.15
SIX4Q9UIU6 MIR126-201ENST00000362291 85 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.29-201ENST00000362570 113 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.785-201ENST00000384290 109 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 MT-TT-201ENST00000387460 66 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 RNU4-62P-201ENST00000410125 130 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 Z98949.2-201ENST00000440996 144 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 AL138752.1-201ENST00000452964 351 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.63□□□□□ -2.15
SIX4Q9UIU6 SNORD11-201ENST00000459124 84 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 RNU7-34P-201ENST00000459394 64 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 HMGN1P7-201ENST00000491722 313 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 OR9P1P-201ENST00000496431 281 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.700-201ENST00000516806 100 ntBASIC1.63□□□□□ -2.15
SIX4Q9UIU6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SIX4Q9UIU6 SNORD68-201ENST00000363214 84 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 RNU6-439P-201ENST00000384188 106 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 Y_RNA.571-201ENST00000384753 98 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 RNU2-64P-201ENST00000411315 191 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.62□□□□□ -2.15
SIX4Q9UIU6 SNRPGP10-201ENST00000432323 225 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 snoU13.27-201ENST00000459278 104 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.62□□□□□ -2.15
SIX4Q9UIU6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 AC099513.1-201ENST00000490423 301 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 RN7SKP164-201ENST00000516138 266 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 RNU6-1007P-201ENST00000516586 107 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 AP002392.1-201ENST00000537692 208 ntBASIC1.62□□□□□ -2.15
SIX4Q9UIU6 SNORD53B-201ENST00000577887 78 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms