Protein–RNA interactions for Protein: Q9UHC7

MKRN1, E3 ubiquitin-protein ligase makorin-1, humanhuman

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1Q9UHC7 UBBP3-201ENST00000445497 241 ntBASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 CYCSP26-201ENST00000534107 320 ntBASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 MIR3169-201ENST00000578032 83 ntBASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 MIR4648-201ENST00000580107 72 ntBASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 AC108081.1-201ENST00000604358 221 ntBASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 AL670379.3-201ENST00000605040 251 ntBASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.38□□□□□ -1.87
MKRN1Q9UHC7 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 SNORD68-201ENST00000363214 84 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 RNU6-23P-201ENST00000363283 107 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 SNORD56.5-201ENST00000364281 72 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 SNORD114-30-201ENST00000364448 72 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 MIR1287-201ENST00000408492 90 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 HMGN2P3-201ENST00000433603 273 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 HMGN2P5-201ENST00000436882 273 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 AC104389.3-201ENST00000445629 235 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 IGHVIII-67-2-201ENST00000519849 88 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 CTSLP2-204ENST00000629029 392 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 MTND5P32-201ENST00000560711 1802 ntBASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
MKRN1Q9UHC7 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 RNU6-1164P-201ENST00000364428 107 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 SNORA11.4-201ENST00000408823 129 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 RPS29P6-201ENST00000438196 145 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 AL021397.1-201ENST00000451806 248 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 Y_RNA.651-201ENST00000459380 103 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 RN7SKP19-201ENST00000516016 252 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 RNU6-589P-201ENST00000516485 107 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 MIR4762-201ENST00000585261 75 ntBASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
MKRN1Q9UHC7 RNA5SP289-201ENST00000362332 137 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 RNU6-1084P-201ENST00000362498 107 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 Y_RNA.346-201ENST00000365385 112 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 MIR548A2-201ENST00000384956 97 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 MIR548A3-201ENST00000385297 97 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 AL138827.1-201ENST00000402666 306 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 AC099677.2-201ENST00000436385 175 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 RN7SL297P-201ENST00000483161 293 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 RNA5SP236-201ENST00000516169 116 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 SNORD33.1-201ENST00000516213 88 ntBASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.35□□□□□ -1.87
MKRN1Q9UHC7 SNORA63.4-201ENST00000362763 126 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 SNORD14E-201ENST00000364009 85 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 RNU6-442P-201ENST00000383968 104 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 MIR9-1-201ENST00000385198 89 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 SNORD77.3-201ENST00000391113 65 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 SNORD88.1-201ENST00000408684 91 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 RNA5SP425-201ENST00000410336 112 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 RNU6-781P-201ENST00000516377 101 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 RNU6-113P-201ENST00000516653 101 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 MIR6733-201ENST00000635723 61 ntBASIC3.34□□□□□ -1.87
MKRN1Q9UHC7 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 AC131280.1-202ENST00000624067 4211 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 U8.5-201ENST00000364528 136 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 MIR29C-201ENST00000385231 88 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 RNA5SP482-201ENST00000391269 118 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 AP004217.1-201ENST00000480579 346 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 RNU7-28P-201ENST00000516759 62 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 AC046143.2-201ENST00000609789 160 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 AC025166.1-201ENST00000612411 163 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 AC006441.5-201ENST00000612680 209 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 AL121890.5-201ENST00000620848 304 ntBASIC3.33□□□□□ -1.88
MKRN1Q9UHC7 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 snoU2-30.1-201ENST00000365012 70 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 MIR518F-201ENST00000384973 87 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 MIRLET7F2-201ENST00000385277 83 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 RNU4-53P-201ENST00000410828 140 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 AC245047.3-201ENST00000429428 127 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 RNA5SP445-201ENST00000515889 115 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 RNU6-1149P-201ENST00000516810 97 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 AC134878.1-201ENST00000619901 243 ntBASIC3.32□□□□□ -1.88
MKRN1Q9UHC7 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 SNORD115-3-201ENST00000363100 82 ntBASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 SNORA22-201ENST00000383907 134 ntBASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 SNORD116-21-201ENST00000384507 92 ntBASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 RNA5SP21-201ENST00000410917 96 ntBASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 AC005786.1-201ENST00000588553 154 ntBASIC3.31□□□□□ -1.88
MKRN1Q9UHC7 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
MKRN1Q9UHC7 RNU1-58P-201ENST00000362413 163 ntBASIC3.3□□□□□ -1.88
MKRN1Q9UHC7 SNORA38-201ENST00000363946 132 ntBASIC3.3□□□□□ -1.88
MKRN1Q9UHC7 RNU6-755P-201ENST00000364400 103 ntBASIC3.3□□□□□ -1.88
MKRN1Q9UHC7 Y_RNA.265-201ENST00000364677 108 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms