Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 AC121758.2-201ENST00000553271 193 ntBASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 SNORA28-201ENST00000606769 126 ntBASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 AC067747.1-201ENST00000608026 250 ntBASIC2.48□□□□□ -2.01
PPARGC1AQ9UBK2 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 RNU6-888P-201ENST00000363010 101 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 MIR624-201ENST00000385217 97 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 SNORA12.1-201ENST00000390873 148 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 RNU11-3P-201ENST00000391111 133 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 HMGN2P39-201ENST00000398005 273 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 RNA5SP24-201ENST00000516478 95 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 IGLV3-17-201ENST00000519099 244 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 AC084364.2-201ENST00000546924 395 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 AC131055.1-201ENST00000584626 316 ntBASIC2.47□□□□□ -2.01
PPARGC1AQ9UBK2 AC245060.5-201ENST00000610778 3293 ntBASIC2.46□□□□□ -2.01
PPARGC1AQ9UBK2 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-1168P-201ENST00000390831 104 ntBASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 RNA5SP127-201ENST00000411051 133 ntBASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 AC234781.5-201ENST00000508429 271 ntBASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 AC026436.1-201ENST00000510537 270 ntBASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 RNA5SP272-201ENST00000516095 111 ntBASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 SNORA31.11-201ENST00000516528 139 ntBASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.46□□□□□ -2.02
PPARGC1AQ9UBK2 Y_RNA.120-201ENST00000363304 110 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 SNORA63D-201ENST00000364359 132 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-1292P-201ENST00000383856 107 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-442P-201ENST00000383968 104 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 MIR144-201ENST00000384886 86 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 SNORA48.1-201ENST00000390879 135 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-460P-201ENST00000391158 108 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 AL606517.2-201ENST00000442855 241 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 AC007751.1-201ENST00000529260 376 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 AC080100.1-201ENST00000624239 5356 ntBASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.45□□□□□ -2.02
PPARGC1AQ9UBK2 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 MIR449A-201ENST00000362113 91 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 RNU4-82P-201ENST00000362443 140 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD68-201ENST00000363214 84 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 Y_RNA.265-201ENST00000364677 108 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 snoU2-30.1-201ENST00000365012 70 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 Y_RNA.336-201ENST00000365307 109 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 MIR802-201ENST00000390235 94 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD72-201ENST00000390994 80 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 SNRPGP13-201ENST00000442212 177 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 HMGN2P32-201ENST00000444648 269 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 MIR5094-201ENST00000578766 85 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 AC006441.5-201ENST00000612680 209 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 MIR8054-201ENST00000620877 86 ntBASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PPARGC1AQ9UBK2 MIR21-201ENST00000362134 72 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 Y_RNA.127-201ENST00000363386 109 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD14E-201ENST00000364009 85 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD114-30-201ENST00000364448 72 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-915P-201ENST00000364943 103 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-80P-201ENST00000384195 107 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 SNORA20-201ENST00000384662 132 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-440P-201ENST00000390882 105 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-1154P-201ENST00000391001 104 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 RNA5SP109-201ENST00000391010 116 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 MLLT10P1-201ENST00000418346 262 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 HMGN2P3-201ENST00000433603 273 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 HMGN2P5-201ENST00000436882 273 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 SNORA18.4-201ENST00000516440 124 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-971P-201ENST00000516920 106 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 SNORA31.25-201ENST00000517242 134 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 Y_RNA.757-201ENST00000578934 114 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 MIR4287-201ENST00000579398 78 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 MIR5007-201ENST00000583098 95 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 AC046143.2-201ENST00000609789 160 ntBASIC2.43□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD116-14-201ENST00000383894 92 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD116-17-201ENST00000383929 92 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD116-15-201ENST00000384445 92 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 SNORD116-19-201ENST00000384729 92 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 MIR597-201ENST00000384968 97 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 RN7SKP200-201ENST00000410564 320 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 RNU2-19P-201ENST00000517288 84 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 AC011603.4-201ENST00000611325 277 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 MIR6840-201ENST00000611937 71 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 U1.36-201ENST00000620684 176 ntBASIC2.42□□□□□ -2.02
PPARGC1AQ9UBK2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6-1084P-201ENST00000362498 107 ntBASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 Y_RNA.218-201ENST00000364218 104 ntBASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 AC055731.1-201ENST00000474387 401 ntBASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.41□□□□□ -2.02
PPARGC1AQ9UBK2 SUB1P4-201ENST00000566062 339 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 171.7 ms