Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 Y_RNA.412-201ENST00000384001 104 ntBASIC2.05□□□□□ -2.08
DNMT3BQ9UBC3 MIR626-201ENST00000385032 94 ntBASIC2.05□□□□□ -2.08
DNMT3BQ9UBC3 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.05□□□□□ -2.08
DNMT3BQ9UBC3 RPL23AP63-201ENST00000498752 471 ntBASIC2.05□□□□□ -2.08
DNMT3BQ9UBC3 AC132825.6-201ENST00000638861 357 ntBASIC2.05□□□□□ -2.08
DNMT3BQ9UBC3 ZNF702P-202ENST00000434269 1966 ntBASIC2.05□□□□□ -2.08
DNMT3BQ9UBC3 RNU4-41P-201ENST00000364426 143 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 RNU6-1080P-201ENST00000383982 107 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 Y_RNA.571-201ENST00000384753 98 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 AL512604.1-201ENST00000404812 257 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 SEPT7P4-201ENST00000437076 306 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 AL606517.2-201ENST00000442855 241 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 RPS27P1-201ENST00000450552 247 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 RNA5SP57-201ENST00000459463 123 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 AL049830.1-201ENST00000468034 425 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 RNA5SP481-201ENST00000516814 122 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 JPX_2.1-201ENST00000614161 69 ntBASIC2.04□□□□□ -2.08
DNMT3BQ9UBC3 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 Y_RNA.24-201ENST00000362508 103 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 SNORA1B-201ENST00000362535 133 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 Y_RNA.182-201ENST00000363880 111 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 snoU2_19.4-201ENST00000364329 80 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 RN7SKP200-201ENST00000410564 320 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 RNU6-383P-201ENST00000410864 94 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 RNA5SP100-201ENST00000410903 110 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 RNA5SP59-201ENST00000410922 110 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 AL158823.1-201ENST00000418441 478 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 RNU7-28P-201ENST00000516759 62 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 RNU6-453P-201ENST00000516819 85 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 MIR8054-201ENST00000620877 86 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
DNMT3BQ9UBC3 RNA5SP276-201ENST00000362580 94 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-704P-201ENST00000364162 103 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.238-201ENST00000364441 102 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RNA5SP160-201ENST00000364866 120 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-969P-201ENST00000383900 105 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-296P-201ENST00000384608 107 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-440P-201ENST00000390882 105 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RNA5SP212-201ENST00000391223 107 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RNA5SP496-201ENST00000391240 109 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 AC003989.2-201ENST00000440224 169 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 TMSB4XP3-201ENST00000445144 114 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 AC023449.1-201ENST00000454464 154 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 HMGN1P7-201ENST00000491722 313 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 RN7SKP164-201ENST00000516138 266 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 MIR4287-201ENST00000579398 78 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 SNORA28-201ENST00000606769 126 ntBASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
DNMT3BQ9UBC3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 RNU6ATAC3P-201ENST00000387974 126 ntBASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-131P-201ENST00000391144 107 ntBASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 AL021397.1-201ENST00000451806 248 ntBASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 SCARNA8-201ENST00000515924 131 ntBASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 MIR514B-201ENST00000516774 80 ntBASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.714-201ENST00000517065 90 ntBASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 uc_338.20-201ENST00000621563 178 ntBASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.01□□□□□ -2.09
DNMT3BQ9UBC3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.7-201ENST00000362352 102 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 SNORA16B-201ENST00000364674 135 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.338-201ENST00000365320 114 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 RNY1P5-201ENST00000383890 115 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.435-201ENST00000384095 112 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.441-201ENST00000384123 112 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 MT-TT-201ENST00000387460 66 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 RNA5SP482-201ENST00000391269 118 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 MIR548I2-201ENST00000408348 149 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 SNORD116-25-201ENST00000516517 92 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-1007P-201ENST00000516586 107 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 RNA5SP437-201ENST00000517249 129 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC2□□□□□ -2.09
DNMT3BQ9UBC3 MIR3658-201ENST00000636291 56 ntBASIC2□□□□□ -2.09
DNMT3BQ9UBC3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
DNMT3BQ9UBC3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.253-201ENST00000364562 112 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 Y_RNA.291-201ENST00000364886 113 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 MIR613-201ENST00000385248 95 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 SNORA17.3-201ENST00000391159 129 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-381P-201ENST00000391259 108 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 AL034345.1-201ENST00000407768 123 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 SNRPGP10-201ENST00000432323 225 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 STAG3L5P-204ENST00000443759 179 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 AC245047.8-201ENST00000456455 284 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 snoU13.27-201ENST00000459278 104 ntBASIC1.99□□□□□ -2.09
DNMT3BQ9UBC3 RNU6-561P-201ENST00000516222 102 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms