Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 Y_RNA.372-201ENST00000365599 102 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 MIR539-201ENST00000365690 78 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 AC069113.1-201ENST00000517763 267 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 AC007012.1-201ENST00000567192 175 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 YWHAEP2-201ENST00000580066 112 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 AC005771.1-201ENST00000585581 349 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 AL138960.2-201ENST00000625145 535 ntBASIC-1.39□□□□□ -2.63
CHD7Q9P2D1 SNORD56.1-201ENST00000362913 68 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 SNORA18-201ENST00000384416 132 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 MIR544A-201ENST00000384855 91 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.657-201ENST00000515983 102 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 AC005776.1-201ENST00000603164 290 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 AL031274.1-201ENST00000450334 232 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 FGF7P6-202ENST00000451282 293 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 RPL30P10-201ENST00000488148 337 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 EIF1AXP2-201ENST00000555940 413 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 AL121655.1-201ENST00000605811 308 ntBASIC-1.4□□□□□ -2.63
CHD7Q9P2D1 RNU6-562P-201ENST00000362731 107 ntBASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 SNORD68-201ENST00000363214 84 ntBASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.229-201ENST00000364347 113 ntBASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 Y_RNA.267-201ENST00000364679 109 ntBASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 RNU6-397P-201ENST00000516226 104 ntBASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 RNU6-143P-201ENST00000516942 93 ntBASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC-1.41□□□□□ -2.63
CHD7Q9P2D1 RNU6-208P-201ENST00000362431 107 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.253-201ENST00000364562 112 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 MTCYBP2-201ENST00000407745 171 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 RNU6-1165P-201ENST00000410119 107 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 MTND1P8-201ENST00000571424 950 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 AC022306.3-201ENST00000619930 550 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 MTND1P7-201ENST00000632801 297 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.222-201ENST00000364264 102 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 SNORD38C-201ENST00000384381 69 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 RNU6-855P-201ENST00000410395 104 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 PMCHL1-202ENST00000423102 261 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 AC244090.1-201ENST00000441884 93 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 AC010486.2-201ENST00000505572 483 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 RNU6-323P-201ENST00000521915 107 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 AC108081.1-201ENST00000604358 221 ntBASIC-1.41□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNY4P10-201ENST00000365571 96 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNU5E-6P-201ENST00000365574 115 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNU6-637P-201ENST00000384050 107 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNU6-376P-201ENST00000384731 106 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNA5SP201-201ENST00000410316 124 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 AC019178.2-201ENST00000423595 505 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 AC022447.4-201ENST00000504053 364 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 MIR548AE1-201ENST00000583292 70 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 AC005520.5-201ENST00000613926 164 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNU6-1084P-201ENST00000362498 107 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 snoU2_19.2-201ENST00000363024 80 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 SNORD115-15-201ENST00000364809 81 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 UBE2V1P11-201ENST00000411559 285 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNU7-57P-201ENST00000459540 60 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 RNA5SP454-201ENST00000517231 127 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 MIR3123-201ENST00000583417 75 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 AF250324.2-201ENST00000608299 610 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 SNX3P1Y-201ENST00000615757 176 ntBASIC-1.42□□□□□ -2.64
CHD7Q9P2D1 MIR30D-201ENST00000362283 70 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 RNU6-245P-201ENST00000384020 107 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.548-201ENST00000384656 105 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.721-201ENST00000517207 102 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 MIR5006-201ENST00000583027 110 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.830-201ENST00000628531 96 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 RNU6-708P-201ENST00000384217 107 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 RNU6-166P-201ENST00000384371 107 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 RNU4-22P-201ENST00000411058 166 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 AC090960.1-201ENST00000421072 306 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 MTATP6P13-201ENST00000438531 667 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 RNU6-437P-201ENST00000459408 95 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 U6.107-201ENST00000637108 79 ntBASIC-1.43□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.91-201ENST00000363042 107 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 SNORA72.6-201ENST00000384520 129 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 MIR1305-201ENST00000408300 86 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 MTND1P33-201ENST00000446251 917 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 MTND3P4-201ENST00000453537 303 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 RNU6-90P-201ENST00000606352 106 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 AC022893.3-201ENST00000607665 437 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 RNA5SP245-201ENST00000364239 121 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 MIR652-201ENST00000385278 98 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 RNU6-592P-201ENST00000411333 103 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 AC004866.1-201ENST00000411748 78 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 VN1R10P-201ENST00000447106 875 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 RNU7-13P-201ENST00000516413 62 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 AC069503.3-201ENST00000618674 145 ntBASIC-1.44□□□□□ -2.64
CHD7Q9P2D1 AC013437.2-201ENST00000639587 677 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 193.3 ms