Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
LRFN1Q9P244 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
LRFN1Q9P244 Y_RNA.200-201ENST00000364018 102 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 RNU6-200P-201ENST00000364743 107 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 RNA5SP138-201ENST00000365098 114 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 MIR660-201ENST00000385235 97 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 MIR1298-201ENST00000408783 112 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 Z98949.2-201ENST00000440996 144 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 HSPE1P24-201ENST00000450782 238 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 RNA5SP182-201ENST00000516064 82 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 AC024405.2-202ENST00000532731 184 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 AC127455.1-201ENST00000565496 145 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 AL365265.1-201ENST00000621045 234 ntBASIC1.8□□□□□ -2.12
LRFN1Q9P244 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.8□□□□□ -2.12
LRFN1Q9P244 MIRLET7C-201ENST00000362160 84 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 Y_RNA.199-201ENST00000364014 102 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 Y_RNA.274-201ENST00000364714 101 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 Y_RNA.304-201ENST00000365011 112 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 MIR513A1-201ENST00000385138 129 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 CALM2P4-201ENST00000430810 426 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 COX6CP14-201ENST00000469580 174 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 RPL23AP54-201ENST00000495129 419 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 RNU6-138P-201ENST00000515952 107 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 RNA5SP168-201ENST00000516642 112 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.79□□□□□ -2.12
LRFN1Q9P244 MIR5089-201ENST00000580047 84 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 MIR3668-201ENST00000582138 75 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.79□□□□□ -2.12
LRFN1Q9P244 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.79□□□□□ -2.12
LRFN1Q9P244 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.79□□□□□ -2.12
LRFN1Q9P244 Y_RNA.83-201ENST00000363005 113 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 U8.5-201ENST00000364528 136 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 Y_RNA.253-201ENST00000364562 112 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 SNORD1A-201ENST00000364968 72 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 SNORA40.18-201ENST00000391200 128 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 RNU1-78P-201ENST00000391248 165 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 U8.16-201ENST00000391279 133 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 SNORA36B-201ENST00000410438 131 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 AC025033.1-201ENST00000463883 194 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.78□□□□□ -2.12
LRFN1Q9P244 RNU6-1053P-201ENST00000515930 101 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 RNY3P16-201ENST00000516338 101 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 MIR4422-201ENST00000581938 83 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 MIR4762-201ENST00000585261 75 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 AL591926.4-201ENST00000616895 298 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 MIR8063-201ENST00000621930 81 ntBASIC1.78□□□□□ -2.12
LRFN1Q9P244 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
LRFN1Q9P244 SNORD33-201ENST00000362761 85 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 RNU6-1205P-201ENST00000363625 106 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 Y_RNA.293-201ENST00000364908 93 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LRFN1Q9P244 RNA5SP338-201ENST00000410495 85 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 AC245517.4-201ENST00000448601 281 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 AL021397.1-201ENST00000451806 248 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 Y_RNA.714-201ENST00000517065 90 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 MIR3935-201ENST00000583472 104 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 AC012493.3-201ENST00000604494 112 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
LRFN1Q9P244 SNORD3E-202ENST00000627253 216 ntBASIC1.77□□□□□ -2.13
LRFN1Q9P244 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
LRFN1Q9P244 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.77□□□□□ -2.13
LRFN1Q9P244 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
LRFN1Q9P244 RNU6-653P-201ENST00000363074 106 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 RNU4-10P-201ENST00000364383 140 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 Y_RNA.262-201ENST00000364641 102 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 RNA5SP160-201ENST00000364866 120 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 Y_RNA.297-201ENST00000364950 91 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 RNU6-144P-201ENST00000383951 107 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 AC108667.1-201ENST00000428618 249 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.76□□□□□ -2.13
LRFN1Q9P244 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.76□□□□□ -2.13
LRFN1Q9P244 MIR4498-201ENST00000577599 66 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 MIR4285-201ENST00000581001 85 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 MIR2681-201ENST00000581814 105 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 SNRPGP19-201ENST00000603826 189 ntBASIC1.76□□□□□ -2.13
LRFN1Q9P244 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LRFN1Q9P244 MIR411-201ENST00000362239 96 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 SNORD68-201ENST00000363214 84 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 Y_RNA.203-201ENST00000364106 102 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 Y_RNA.308-201ENST00000365043 101 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 RPL31P63-201ENST00000422565 375 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 MTND5P15-201ENST00000434246 349 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 AC027119.1-201ENST00000440877 241 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.75□□□□□ -2.13
LRFN1Q9P244 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.75□□□□□ -2.13
LRFN1Q9P244 HMGN1P7-201ENST00000491722 313 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.75□□□□□ -2.13
LRFN1Q9P244 AC079140.2-201ENST00000506193 142 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.75□□□□□ -2.13
LRFN1Q9P244 RNA5SP445-201ENST00000515889 115 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 SUMO2P16-201ENST00000519475 264 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.75□□□□□ -2.13
LRFN1Q9P244 AC027279.3-201ENST00000625055 122 ntBASIC1.75□□□□□ -2.13
LRFN1Q9P244 RNU6-674P-201ENST00000363831 107 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 Y_RNA.226-201ENST00000364337 114 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 RNU6-923P-201ENST00000364753 107 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 RNA5SP259-201ENST00000365541 109 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 Y_RNA.572-201ENST00000384757 98 ntBASIC1.74□□□□□ -2.13
LRFN1Q9P244 MIR626-201ENST00000385032 94 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms