Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 RNU6-578P-201ENST00000390980 103 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-239P-201ENST00000390990 99 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 RNA5SP212-201ENST00000391223 107 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-1186P-201ENST00000410429 97 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 SEPT7P4-201ENST00000437076 306 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU7-116P-201ENST00000516940 62 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR4724-201ENST00000579485 89 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR4431-201ENST00000579990 94 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR6845-201ENST00000613182 61 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 AL773524.1-201ENST00000614065 229 ntBASIC1.94□□□□□ -2.1
NCKIPSDQ9NZQ3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 Y_RNA.343-201ENST00000365354 112 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 SNORD116-18-201ENST00000383961 92 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 Y_RNA.400-201ENST00000383963 111 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 SNORA8-201ENST00000384574 139 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-376P-201ENST00000384731 106 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR548I2-201ENST00000408348 149 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 SNORA36B-201ENST00000410438 131 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-383P-201ENST00000410864 94 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 AL445685.2-201ENST00000422551 342 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-346P-201ENST00000516288 111 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU1-142P-201ENST00000516682 145 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR4299-201ENST00000577899 72 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 AC091178.2-201ENST00000584401 117 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 POLR3GP1-201ENST00000594073 261 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 SNRPGP19-201ENST00000603826 189 ntBASIC1.93□□□□□ -2.1
NCKIPSDQ9NZQ3 MIR367-201ENST00000362299 68 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 Y_RNA.24-201ENST00000362508 103 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU2-7P-201ENST00000410794 178 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 AC244636.1-201ENST00000421152 228 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 AL606517.2-201ENST00000442855 241 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 RPS26P45-201ENST00000471748 340 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 SCARNA8-201ENST00000515924 131 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU7-99P-201ENST00000516271 62 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 AL929325.1-201ENST00000603096 117 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 AL359075.3-201ENST00000613288 217 ntBASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
NCKIPSDQ9NZQ3 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-1019P-201ENST00000364424 107 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-1130P-201ENST00000365434 107 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-81P-201ENST00000365608 104 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-969P-201ENST00000383900 105 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNY3P5-201ENST00000384127 102 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-1228P-201ENST00000391014 107 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AL606753.1-201ENST00000427435 87 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AC107027.2-201ENST00000512197 115 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU7-121P-201ENST00000516604 62 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 RNU6-453P-201ENST00000516819 85 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AC109810.1-201ENST00000534066 224 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AC084364.2-201ENST00000546924 395 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 SUB1P4-201ENST00000566062 339 ntBASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
NCKIPSDQ9NZQ3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
NCKIPSDQ9NZQ3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 SNORA72-201ENST00000384339 132 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR520A-201ENST00000384862 85 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR1278-201ENST00000408753 81 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 RNA5SP489-201ENST00000410986 109 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 AC069257.2-201ENST00000441819 155 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 RPL23AP54-201ENST00000495129 419 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-1096P-201ENST00000517089 102 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU4-13P-201ENST00000364019 141 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.229-201ENST00000364347 113 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.488-201ENST00000384403 102 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 RNA5SP496-201ENST00000391240 109 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 RNA5SP233-201ENST00000459153 113 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-437P-201ENST00000459408 95 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 AL163195.1-201ENST00000496941 348 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-1007P-201ENST00000516586 107 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 AP000942.3-201ENST00000603702 160 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 AL627230.6-201ENST00000611129 280 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 Y_RNA.778-201ENST00000620203 90 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 MIR6079-201ENST00000635807 62 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 AC100821.1-201ENST00000523153 2479 ntBASIC1.89□□□□□ -2.11
NCKIPSDQ9NZQ3 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-112P-201ENST00000363599 104 ntBASIC1.88□□□□□ -2.11
NCKIPSDQ9NZQ3 RNU6-674P-201ENST00000363831 107 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms