Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 AL392103.1-201ENST00000447000 198 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 U7.7-201ENST00000459276 60 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 AC091951.2-201ENST00000500762 203 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 RNU7-41P-201ENST00000515917 61 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 RNU6-699P-201ENST00000517081 110 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.718-201ENST00000517110 102 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 AC131055.1-201ENST00000584626 316 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 AP003357.1-201ENST00000604497 148 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 AL353765.1-201ENST00000605514 183 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 MIR4272-201ENST00000635924 64 ntBASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
HOXC10Q9NYD6 MIR103A2-201ENST00000362154 78 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 RNY3P11-201ENST00000364153 102 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.314-201ENST00000365114 102 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 RNU6-1175P-201ENST00000365200 107 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 RNU6-708P-201ENST00000384217 107 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 SNORD63-201ENST00000384262 68 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.463-201ENST00000384271 102 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 MIR628-201ENST00000385229 95 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 RNU6-131P-201ENST00000391144 107 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 RPS26P5-201ENST00000418544 335 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 AC098934.3-201ENST00000430450 190 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 AL035398.1-201ENST00000430869 322 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 RNU7-169P-201ENST00000459456 61 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 SNORD123-201ENST00000459473 70 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 AC113410.1-201ENST00000505029 247 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 AC004817.2-201ENST00000561794 651 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 AC011476.5-201ENST00000615594 130 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 AC243829.3-201ENST00000622177 108 ntBASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.64□□□□□ -2.31
HOXC10Q9NYD6 RNU6-1084P-201ENST00000362498 107 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 SNORD81.1-201ENST00000363064 77 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.142-201ENST00000363491 102 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 RNU6-324P-201ENST00000363957 106 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 MIR516B2-201ENST00000385190 85 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 SNRPGP10-201ENST00000432323 225 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 SNRPGP14-201ENST00000435400 219 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 AC025627.3-201ENST00000582078 182 ntBASIC0.63□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.70-201ENST00000362886 110 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.187-201ENST00000363918 113 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 RNU1-115P-201ENST00000365329 160 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.370-201ENST00000365589 108 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 MIR1302-7-201ENST00000408841 72 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AF228730.4-201ENST00000421457 183 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AC098869.1-201ENST00000481627 292 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 COX6CP6-201ENST00000490840 228 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 RNU6-1110P-201ENST00000516462 101 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 SNORA18.7-201ENST00000516910 131 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AC109810.1-201ENST00000534066 224 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 UBE2V2P2-201ENST00000587677 504 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AL121655.1-201ENST00000605811 308 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AL138825.1-201ENST00000618587 192 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 AC008133.2-201ENST00000624540 351 ntBASIC0.62□□□□□ -2.31
HOXC10Q9NYD6 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 RNU6-1115P-201ENST00000362490 106 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.203-201ENST00000364106 102 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.252-201ENST00000364556 101 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.259-201ENST00000364619 101 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.341-201ENST00000365341 102 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.428-201ENST00000384078 102 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 RNU6-855P-201ENST00000410395 104 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 HMGN1P10-201ENST00000474557 553 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 RNU7-115P-201ENST00000516433 55 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 SNORA40.14-201ENST00000516543 86 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 RNU6-229P-201ENST00000516614 102 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 SNORD116.3-201ENST00000517176 78 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 AC036111.3-201ENST00000526389 112 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 AC127455.1-201ENST00000565496 145 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 AC006600.1-201ENST00000572529 153 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 POLR3GP1-201ENST00000594073 261 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 Z83818.1-201ENST00000603584 150 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 AL132765.2-201ENST00000610812 351 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
HOXC10Q9NYD6 AC134026.1-201ENST00000623249 2239 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 RNU6-1283P-201ENST00000365314 105 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.384-201ENST00000383909 102 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.458-201ENST00000384240 102 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 MIR92A1-201ENST00000385233 78 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 SNORD111-201ENST00000408139 94 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 RNU6-1304P-201ENST00000411374 106 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 AC024067.1-201ENST00000426199 223 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 MIR5188-201ENST00000583467 113 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.772-201ENST00000606692 102 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 MTND4LP32-201ENST00000636111 270 ntBASIC0.6□□□□□ -2.31
HOXC10Q9NYD6 RNU6-674P-201ENST00000363831 107 ntBASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 SNORD14E-201ENST00000364009 85 ntBASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 Y_RNA.390-201ENST00000383932 102 ntBASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 SNORD89-201ENST00000390981 114 ntBASIC0.59□□□□□ -2.31
HOXC10Q9NYD6 MLLT10P1-201ENST00000418346 262 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms