Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 RNU6-1061P-201ENST00000516530 99 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 MTND5P34-201ENST00000568888 325 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 MIR6079-201ENST00000635807 62 ntBASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
PDLIM7Q9NR12 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 Y_RNA.52-201ENST00000362760 96 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 SNORA63.4-201ENST00000362763 126 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 RNU6-309P-201ENST00000364573 106 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 AL353689.1-201ENST00000438895 199 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 HMGN2P23-201ENST00000456759 269 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 RNU1-104P-201ENST00000517280 175 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 CYCSP26-201ENST00000534107 320 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 NDUFA5P6-201ENST00000542110 379 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 AC133485.4-201ENST00000561835 220 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 AC138907.4-201ENST00000570107 226 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 AC046143.2-201ENST00000609789 160 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 U6.108-201ENST00000637764 58 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 MAPK10-266ENST00000641066 6555 ntBASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.7□□□□□ -1.98
PDLIM7Q9NR12 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 AC018630.2-201ENST00000534866 2403 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 SNORA33-201ENST00000363664 130 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 SNORD72-201ENST00000390994 80 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 RNY4P18-201ENST00000391107 89 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 RNA5SP127-201ENST00000411051 133 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 Y_RNA.630-201ENST00000411370 108 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 SRIP3-201ENST00000413200 219 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 RNU6-504P-201ENST00000516568 104 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 RNU1-142P-201ENST00000516682 145 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 MIR3129-201ENST00000581095 76 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 AL365205.2-201ENST00000594586 68 ntBASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PDLIM7Q9NR12 SNORA1-201ENST00000384107 130 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 MIR624-201ENST00000385217 97 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 MIR524-201ENST00000385242 87 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 RNU11-5P-201ENST00000391216 129 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 PDCD5P2-201ENST00000507570 312 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 RNU6-341P-201ENST00000516973 96 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 AC108081.1-201ENST00000604358 221 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 ZNF271P-202ENST00000465539 1970 ntBASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.68□□□□□ -1.98
PDLIM7Q9NR12 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 Y_RNA.99-201ENST00000363138 105 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 RNU1-52P-201ENST00000384190 164 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 RNA5SP323-201ENST00000391094 133 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 MIR891A-201ENST00000401237 79 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 MIR1262-201ENST00000408276 93 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 AC018634.1-201ENST00000437554 401 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 AC026436.1-201ENST00000510537 270 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 SNORD33.1-201ENST00000516213 88 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 AC008507.4-201ENST00000585464 127 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 AC067747.1-201ENST00000608026 250 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 AL353149.1-201ENST00000610667 244 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 MIR1291-201ENST00000627649 87 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 U6.95-201ENST00000636931 70 ntBASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
PDLIM7Q9NR12 MIR126-201ENST00000362291 85 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 SNORD61-201ENST00000384252 73 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 SNORA8-201ENST00000384574 139 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 AL117342.1-201ENST00000404861 406 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 ATP5J2P3-201ENST00000451550 258 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 RNU1-131P-201ENST00000458943 161 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 Y_RNA.666-201ENST00000516187 112 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 Y_RNA.709-201ENST00000516952 92 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 RNU6-1270P-201ENST00000517128 108 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 AL591926.4-201ENST00000616895 298 ntBASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
PDLIM7Q9NR12 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
PDLIM7Q9NR12 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.65□□□□□ -1.98
PDLIM7Q9NR12 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 RNU6-647P-201ENST00000364243 107 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 SNORD58C-201ENST00000365223 64 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 RNU1-148P-201ENST00000384472 162 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 RNU6-160P-201ENST00000384591 107 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 RPS26P45-201ENST00000471748 340 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 RNU6-781P-201ENST00000516377 101 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 AL022345.2-201ENST00000606307 135 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC2.65□□□□□ -1.99
PDLIM7Q9NR12 MIR21-201ENST00000362134 72 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 SNORA1B-201ENST00000362535 133 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 Y_RNA.617-201ENST00000410920 90 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 RNA5SP270-201ENST00000411361 118 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 RNU6-589P-201ENST00000516485 107 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 RNA5SP137-201ENST00000516833 135 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 AL358944.1-201ENST00000528537 144 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 AC022217.4-201ENST00000604389 163 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 MIR6873-201ENST00000622788 63 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 MIR203B-201ENST00000636080 86 ntBASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
PDLIM7Q9NR12 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 153.1 ms