Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 MIR342-201ENST00000362212 99 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 Y_RNA.537-201ENST00000384626 109 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 MIR181B1-201ENST00000385240 110 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 MIR548A3-201ENST00000385297 97 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 SNORA57.1-201ENST00000391227 145 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 RPS29P29-201ENST00000456396 171 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 RNU7-67P-201ENST00000459003 62 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 COX6CP6-201ENST00000490840 228 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 RNU6-240P-201ENST00000516098 97 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 AC023632.4-201ENST00000517783 191 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 MIR3160-1-201ENST00000577972 85 ntBASIC3.9□□□□□ -1.79
RTN4Q9NQC3 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.89□□□□□ -1.79
RTN4Q9NQC3 RNU6-457P-201ENST00000363999 107 ntBASIC3.89□□□□□ -1.79
RTN4Q9NQC3 RNU6-919P-201ENST00000516731 104 ntBASIC3.89□□□□□ -1.79
RTN4Q9NQC3 MIR3152-201ENST00000579801 74 ntBASIC3.89□□□□□ -1.79
RTN4Q9NQC3 VN1R85P-201ENST00000601587 426 ntBASIC3.89□□□□□ -1.79
RTN4Q9NQC3 AC108081.1-201ENST00000604358 221 ntBASIC3.89□□□□□ -1.79
RTN4Q9NQC3 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
RTN4Q9NQC3 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
RTN4Q9NQC3 Y_RNA.366-201ENST00000365540 102 ntBASIC3.88□□□□□ -1.79
RTN4Q9NQC3 RNU6-203P-201ENST00000384038 104 ntBASIC3.88□□□□□ -1.79
RTN4Q9NQC3 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
RTN4Q9NQC3 MIR1263-201ENST00000408324 86 ntBASIC3.88□□□□□ -1.79
RTN4Q9NQC3 AC021443.1-201ENST00000604478 211 ntBASIC3.88□□□□□ -1.79
RTN4Q9NQC3 MIR8074-201ENST00000615081 81 ntBASIC3.88□□□□□ -1.79
RTN4Q9NQC3 MIR6875-201ENST00000617506 72 ntBASIC3.88□□□□□ -1.79
RTN4Q9NQC3 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.88□□□□□ -1.79
RTN4Q9NQC3 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.88□□□□□ -1.79
RTN4Q9NQC3 MIR17-201ENST00000385012 84 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 MIR513A1-201ENST00000385138 129 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 AL451046.2-201ENST00000403074 277 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 AL023284.1-201ENST00000403956 276 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 AL161935.2-201ENST00000414627 60 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN4Q9NQC3 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC3.87□□□□□ -1.79
RTN4Q9NQC3 RNU6-781P-201ENST00000516377 101 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 SUMO2P16-201ENST00000519475 264 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 MTND5P34-201ENST00000568888 325 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 AC009487.2-201ENST00000420969 6821 ntBASIC3.87□□□□□ -1.79
RTN4Q9NQC3 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTN4Q9NQC3 SNORA16B-201ENST00000364674 135 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 RNU6-215P-201ENST00000365169 102 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 SNORA46-201ENST00000384762 135 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 MIR653-201ENST00000385279 96 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.86□□□□□ -1.79
RTN4Q9NQC3 RNU2-11P-201ENST00000459191 187 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 AC026402.1-201ENST00000513642 170 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 RNA5SP217-201ENST00000515959 91 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 RNU1-45P-201ENST00000517191 141 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 MIR1254-2-201ENST00000579553 63 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 MIR4286-201ENST00000580651 93 ntBASIC3.86□□□□□ -1.79
RTN4Q9NQC3 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC3.86□□□□□ -1.79
RTN4Q9NQC3 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
RTN4Q9NQC3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTN4Q9NQC3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
RTN4Q9NQC3 Y_RNA.213-201ENST00000364178 111 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 RNA5SP51-201ENST00000364750 119 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 RNU6-1325P-201ENST00000364905 105 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 SNORA24-201ENST00000384096 131 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 Y_RNA.528-201ENST00000384575 108 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.85□□□□□ -1.79
RTN4Q9NQC3 UQCRHP3-201ENST00000451503 251 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 RNU2-13P-201ENST00000515909 113 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 DNAJC19P9-201ENST00000555084 351 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 AP003355.3-201ENST00000623465 114 ntBASIC3.85□□□□□ -1.79
RTN4Q9NQC3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN4Q9NQC3 MTND5P18-201ENST00000445624 1801 ntBASIC3.84□□□□□ -1.79
RTN4Q9NQC3 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN4Q9NQC3 RNA5SP259-201ENST00000365541 109 ntBASIC3.84□□□□□ -1.79
RTN4Q9NQC3 Y_RNA.525-201ENST00000384570 113 ntBASIC3.84□□□□□ -1.79
RTN4Q9NQC3 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RTN4Q9NQC3 MIR4299-201ENST00000577899 72 ntBASIC3.84□□□□□ -1.79
RTN4Q9NQC3 MIR548AR-201ENST00000582191 57 ntBASIC3.84□□□□□ -1.79
RTN4Q9NQC3 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.84□□□□□ -1.79
RTN4Q9NQC3 AC243994.1-201ENST00000618627 109 ntBASIC3.84□□□□□ -1.79
RTN4Q9NQC3 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.84□□□□□ -1.79
RTN4Q9NQC3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RTN4Q9NQC3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.83□□□□□ -1.8
RTN4Q9NQC3 SNORD20-201ENST00000384550 80 ntBASIC3.83□□□□□ -1.8
RTN4Q9NQC3 RNU7-73P-201ENST00000458743 63 ntBASIC3.83□□□□□ -1.8
RTN4Q9NQC3 RNA5SP233-201ENST00000459153 113 ntBASIC3.83□□□□□ -1.8
RTN4Q9NQC3 SNORA31.15-201ENST00000516771 132 ntBASIC3.83□□□□□ -1.8
RTN4Q9NQC3 AL049779.4-201ENST00000604500 156 ntBASIC3.83□□□□□ -1.8
RTN4Q9NQC3 FAS-AS1.2-201ENST00000620386 170 ntBASIC3.83□□□□□ -1.8
RTN4Q9NQC3 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTN4Q9NQC3 U8.11-201ENST00000384699 133 ntBASIC3.82□□□□□ -1.8
RTN4Q9NQC3 U8.18-201ENST00000459285 133 ntBASIC3.82□□□□□ -1.8
RTN4Q9NQC3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC3.82□□□□□ -1.8
RTN4Q9NQC3 MIR4305-201ENST00000583252 102 ntBASIC3.82□□□□□ -1.8
RTN4Q9NQC3 AL357312.1-201ENST00000603879 298 ntBASIC3.82□□□□□ -1.8
RTN4Q9NQC3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC3.81□□□□□ -1.8
RTN4Q9NQC3 MIR570-201ENST00000384917 97 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 RPL32P35-201ENST00000415214 394 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 AC115115.1-201ENST00000449927 248 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 Y_RNA.649-201ENST00000459077 103 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 SNORD33.1-201ENST00000516213 88 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 SNORA70.18-201ENST00000516696 98 ntBASIC3.81□□□□□ -1.8
RTN4Q9NQC3 AC002984.1-201ENST00000591692 448 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms