Protein–RNA interactions for Protein: Q9NPR2

SEMA4B, Semaphorin-4B, humanhuman

Predicted RBP Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4BQ9NPR2 SNRPGP8-201ENST00000454064 226 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 snoU13.26-201ENST00000459452 105 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 MRPS17P9-201ENST00000511924 393 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 AC107027.2-201ENST00000512197 115 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 SNORD116-25-201ENST00000516517 92 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 RNU7-121P-201ENST00000516604 62 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 MIR6079-201ENST00000635807 62 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
SEMA4BQ9NPR2 AC018630.2-201ENST00000534866 2403 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 RNU6-1209P-201ENST00000363655 107 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 SNORD45.3-201ENST00000363836 72 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.796-201ENST00000364268 102 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.267-201ENST00000364679 109 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.799-201ENST00000364992 102 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.400-201ENST00000383963 111 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 RNU6-643P-201ENST00000384018 107 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 AL163195.1-201ENST00000496941 348 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 MIR514B-201ENST00000516774 80 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 RNA5SP481-201ENST00000516814 122 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 AC084364.2-201ENST00000546924 395 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 MIR5089-201ENST00000580047 84 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 MIR4713-201ENST00000582691 75 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 SNRPGP19-201ENST00000603826 189 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.778-201ENST00000620203 90 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 MIR3658-201ENST00000636291 56 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 U2.22-201ENST00000636441 106 ntBASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
SEMA4BQ9NPR2 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 SNORA19-201ENST00000384737 128 ntBASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 MIR613-201ENST00000385248 95 ntBASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 AC079804.2-201ENST00000490376 200 ntBASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 MIR2681-201ENST00000581814 105 ntBASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 MIR6715A-201ENST00000615929 79 ntBASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 MIR219B-201ENST00000637023 88 ntBASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SEMA4BQ9NPR2 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 SNORD114-1-201ENST00000362705 72 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 RNU6-704P-201ENST00000364162 103 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.215-201ENST00000364204 112 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 MIR1289-2-201ENST00000408360 111 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 AC245047.4-201ENST00000433189 144 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 TMSB4XP3-201ENST00000445144 114 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 SNORD11-201ENST00000459124 84 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 RPS26P45-201ENST00000471748 340 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 RNA5SP364-201ENST00000516938 78 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 AC022254.1-201ENST00000567857 235 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 uc_338.4-201ENST00000616635 176 ntBASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
SEMA4BQ9NPR2 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 SNORA63D-201ENST00000364359 132 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.337-201ENST00000365312 102 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 RNU4-52P-201ENST00000384209 138 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 Y_RNA.488-201ENST00000384403 102 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 RNU6-131P-201ENST00000391144 107 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 RNU4-43P-201ENST00000410628 137 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 RNU7-94P-201ENST00000459576 63 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 RNA5SP272-201ENST00000516095 111 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 RNU6-341P-201ENST00000516973 96 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 MIR3124-201ENST00000582636 67 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 DNAJC19P2-201ENST00000593340 302 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 JPX_2.1-201ENST00000614161 69 ntBASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SEMA4BQ9NPR2 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.1
SEMA4BQ9NPR2 SNORA1B-201ENST00000362535 133 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 Y_RNA.253-201ENST00000364562 112 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 RNU4-11P-201ENST00000365287 132 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 SNORD50.2-201ENST00000365465 70 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 RNU6-484P-201ENST00000384016 107 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 RNU6-296P-201ENST00000384608 107 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 RNU6-950P-201ENST00000384651 107 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 MIR562-201ENST00000384894 95 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 FTH1P12-201ENST00000432137 551 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 AL606517.2-201ENST00000442855 241 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 UBL5P3-201ENST00000475112 231 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 HMGN1P7-201ENST00000491722 313 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 SNORA31.17-201ENST00000516953 127 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 MIR3935-201ENST00000583472 104 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 AC132825.6-201ENST00000638861 357 ntBASIC1.9□□□□□ -2.11
SEMA4BQ9NPR2 Y_RNA.343-201ENST00000365354 112 ntBASIC1.89□□□□□ -2.11
SEMA4BQ9NPR2 Y_RNA.432-201ENST00000384087 111 ntBASIC1.89□□□□□ -2.11
SEMA4BQ9NPR2 Y_RNA.521-201ENST00000384560 114 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 178.4 ms