Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 RNA5SP57-201ENST00000459463 123 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.23□□□□□ -2.05
VTA1Q9NP79 AC104435.1-201ENST00000483483 166 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 RNA5SP458-201ENST00000516188 119 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 RNY3P16-201ENST00000516338 101 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 SNORA31.10-201ENST00000516482 106 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 AL591926.4-201ENST00000616895 298 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 FTX_2.1-201ENST00000618816 94 ntBASIC2.23□□□□□ -2.05
VTA1Q9NP79 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
VTA1Q9NP79 snoU2_19.4-201ENST00000364329 80 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 RNU4-10P-201ENST00000364383 140 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 SNORA16B-201ENST00000364674 135 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 MIR17-201ENST00000385012 84 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 MIR522-201ENST00000385071 87 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 SNORA26-201ENST00000391286 122 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.22□□□□□ -2.05
VTA1Q9NP79 RNA5SP233-201ENST00000459153 113 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 OR9P1P-201ENST00000496431 281 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 Y_RNA.797-201ENST00000515977 94 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 MRPS18CP4-201ENST00000535821 231 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 MIR5089-201ENST00000580047 84 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 MIR4448-201ENST00000584360 86 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 AC027279.3-201ENST00000625055 122 ntBASIC2.22□□□□□ -2.05
VTA1Q9NP79 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.05
VTA1Q9NP79 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
VTA1Q9NP79 RNU6-661P-201ENST00000362409 107 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 RNU6-1138P-201ENST00000365359 106 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 RNU6-728P-201ENST00000365375 104 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.21□□□□□ -2.06
VTA1Q9NP79 PIGPP3-201ENST00000425307 415 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 STAG3L5P-204ENST00000443759 179 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 HMGN2P32-201ENST00000444648 269 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 AC005840.1-201ENST00000498412 377 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 SNORA31.17-201ENST00000516953 127 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 AL160236.1-201ENST00000556317 195 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 AC022254.1-201ENST00000567857 235 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 MIR4713-201ENST00000582691 75 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 AL513423.1-201ENST00000621695 132 ntBASIC2.21□□□□□ -2.06
VTA1Q9NP79 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC2.21□□□□□ -2.06
VTA1Q9NP79 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
VTA1Q9NP79 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
VTA1Q9NP79 Y_RNA.23-201ENST00000362496 106 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 RNA5SP276-201ENST00000362580 94 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 Y_RNA.240-201ENST00000364469 95 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 RNU6-275P-201ENST00000364910 107 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 RNU6-47P-201ENST00000383866 107 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 Y_RNA.555-201ENST00000384673 110 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 RNU6-578P-201ENST00000390980 103 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 SNORA40.18-201ENST00000391200 128 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 AL606845.1-201ENST00000404881 255 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 AL445685.2-201ENST00000422551 342 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 PGBD4P5-201ENST00000445958 426 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.2□□□□□ -2.06
VTA1Q9NP79 AC002984.1-201ENST00000591692 448 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.2□□□□□ -2.06
VTA1Q9NP79 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
VTA1Q9NP79 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
VTA1Q9NP79 AC080100.1-201ENST00000624239 5356 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 SNORD68-201ENST00000363214 84 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 Y_RNA.270-201ENST00000364693 104 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 snoU2-30.1-201ENST00000365012 70 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 Y_RNA.336-201ENST00000365307 109 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 RNU4-43P-201ENST00000410628 137 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.19□□□□□ -2.06
VTA1Q9NP79 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.19□□□□□ -2.06
VTA1Q9NP79 CYCTP-201ENST00000504253 315 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 Y_RNA.662-201ENST00000516028 97 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 SNORD77.4-201ENST00000516158 81 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 MIR514B-201ENST00000516774 80 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.19□□□□□ -2.06
VTA1Q9NP79 RNU2-4P-201ENST00000606190 192 ntBASIC2.19□□□□□ -2.06
VTA1Q9NP79 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
VTA1Q9NP79 RNU1-17P-201ENST00000363022 152 ntBASIC2.18□□□□□ -2.06
VTA1Q9NP79 RNA5SP37-201ENST00000365420 130 ntBASIC2.18□□□□□ -2.06
VTA1Q9NP79 SNORA79-201ENST00000408376 140 ntBASIC2.18□□□□□ -2.06
VTA1Q9NP79 AC245047.8-201ENST00000456455 284 ntBASIC2.18□□□□□ -2.06
VTA1Q9NP79 RNU7-34P-201ENST00000459394 64 ntBASIC2.18□□□□□ -2.06
VTA1Q9NP79 SCARNA8-201ENST00000515924 131 ntBASIC2.18□□□□□ -2.06
VTA1Q9NP79 RNA5SP153-201ENST00000516498 76 ntBASIC2.18□□□□□ -2.06
VTA1Q9NP79 RNU6-1123P-201ENST00000362347 106 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 RNU6-1084P-201ENST00000362498 107 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 Y_RNA.182-201ENST00000363880 111 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 SNORA4.2-201ENST00000365313 147 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 Y_RNA.572-201ENST00000384757 98 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 Y_RNA.587-201ENST00000391210 103 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 AC107393.1-201ENST00000512403 346 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 RNU6-1299P-201ENST00000516316 100 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 AC109810.1-201ENST00000534066 224 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.17□□□□□ -2.06
VTA1Q9NP79 AC108706.1-201ENST00000611053 297 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 AL627230.6-201ENST00000611129 280 ntBASIC2.17□□□□□ -2.06
VTA1Q9NP79 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VTA1Q9NP79 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VTA1Q9NP79 RNU6-414P-201ENST00000363705 104 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 MLLT10P1-201ENST00000418346 262 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 RPS27P21-201ENST00000486977 252 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 NDUFA4P2-201ENST00000489989 244 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 SNORA44.1-201ENST00000517031 108 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 MIR4299-201ENST00000577899 72 ntBASIC2.16□□□□□ -2.06
VTA1Q9NP79 AC008507.4-201ENST00000585464 127 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms