Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 Y_RNA.351-201ENST00000365436 96 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 MIR515-2-201ENST00000384883 83 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 MIR515-1-201ENST00000384884 83 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 RNU2-63P-201ENST00000410792 194 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 RNU6-592P-201ENST00000411333 103 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 SNRPGP14-201ENST00000435400 219 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 PGBD4P5-201ENST00000445958 426 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 RN7SL20P-201ENST00000488827 297 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 SNORD36C-201ENST00000516733 66 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 SNORA18.7-201ENST00000516910 131 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 AC026421.1-201ENST00000519101 163 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 DEFB131E-201ENST00000532329 154 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 AC022523.2-201ENST00000561045 150 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.56□□□□□ -2
GCM1Q9NP62 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 MAPK10-266ENST00000641066 6555 ntBASIC2.56□□□□□ -2
GCM1Q9NP62 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.56□□□□□ -2
GCM1Q9NP62 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.56□□□□□ -2
GCM1Q9NP62 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.55□□□□□ -2
GCM1Q9NP62 AC073325.2-201ENST00000339545 159 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 U8.5-201ENST00000364528 136 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 RNU6-1134P-201ENST00000365156 101 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 Y_RNA.336-201ENST00000365307 109 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 Y_RNA.454-201ENST00000384224 113 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 SNORA8-201ENST00000384574 139 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 MIR561-201ENST00000385216 97 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 RNU6-816P-201ENST00000390914 107 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 RNU6-1268P-201ENST00000391214 107 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 RNU6-1239P-201ENST00000391310 107 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 RPL21P3-201ENST00000395517 478 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 RNA5SP274-201ENST00000410484 108 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.55□□□□□ -2
GCM1Q9NP62 AC107083.1-201ENST00000439643 279 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 AC087499.4-201ENST00000448505 178 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 AC024995.1-201ENST00000523014 93 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 AP003484.1-201ENST00000530974 250 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.55□□□□□ -2
GCM1Q9NP62 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 AL590808.1-201ENST00000618696 141 ntBASIC2.55□□□□□ -2
GCM1Q9NP62 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
GCM1Q9NP62 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
GCM1Q9NP62 SNORA48.2-201ENST00000390926 124 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 RNU6-938P-201ENST00000411285 103 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 RNA5SP492-201ENST00000411330 114 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.54□□□□□ -2
GCM1Q9NP62 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.54□□□□□ -2
GCM1Q9NP62 UQCRHP3-201ENST00000451503 251 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.54□□□□□ -2
GCM1Q9NP62 S100A11P2-201ENST00000467589 312 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 SCARNA23-201ENST00000516060 130 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 AL355297.2-201ENST00000604792 129 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 AL449363.1-201ENST00000617815 186 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.54□□□□□ -2
GCM1Q9NP62 AC008264.2-201ENST00000610193 3731 ntBASIC2.54□□□□□ -2
GCM1Q9NP62 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.53□□□□□ -2
GCM1Q9NP62 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.53□□□□□ -2
GCM1Q9NP62 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.53□□□□□ -2
GCM1Q9NP62 MIR494-201ENST00000349529 81 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 RNY3P2-201ENST00000362918 102 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 SNORA33-201ENST00000363664 130 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 Y_RNA.219-201ENST00000364232 113 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 Y_RNA.466-201ENST00000384294 113 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 SNORA46-201ENST00000384762 135 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 MIR128-1-201ENST00000384921 82 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 SNORD78.1-201ENST00000390866 65 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 AC109327.2-201ENST00000448339 378 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 ATP5J2P3-201ENST00000451550 258 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 RN7SL75P-201ENST00000461926 281 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 RN7SL636P-201ENST00000497504 294 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 RNU2-35P-201ENST00000516446 142 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 SNORD45.4-201ENST00000516629 73 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 RNU7-6P-201ENST00000516845 62 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.53□□□□□ -2
GCM1Q9NP62 AC007318.2-201ENST00000620999 243 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 AC091932.4-201ENST00000623386 200 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 CTSLP2-204ENST00000629029 392 ntBASIC2.53□□□□□ -2
GCM1Q9NP62 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
GCM1Q9NP62 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
GCM1Q9NP62 MIR592-201ENST00000384959 97 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 AL627390.1-201ENST00000396055 340 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 SRIP3-201ENST00000413200 219 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 AC022018.1-201ENST00000430685 241 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 RNU6-893P-201ENST00000458841 100 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 AL163195.1-201ENST00000496941 348 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.52□□□□□ -2.01
GCM1Q9NP62 RNU6-667P-201ENST00000517186 102 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 AC005000.2-201ENST00000605468 310 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 AL161431.1-201ENST00000618966 4205 ntBASIC2.52□□□□□ -2.01
GCM1Q9NP62 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
GCM1Q9NP62 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GCM1Q9NP62 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
GCM1Q9NP62 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.51□□□□□ -2.01
GCM1Q9NP62 Y_RNA.10-201ENST00000362371 110 ntBASIC2.51□□□□□ -2.01
GCM1Q9NP62 SNORA38-201ENST00000363946 132 ntBASIC2.51□□□□□ -2.01
GCM1Q9NP62 SNORA80E-201ENST00000384744 137 ntBASIC2.51□□□□□ -2.01
GCM1Q9NP62 Y_RNA.601-201ENST00000410500 113 ntBASIC2.51□□□□□ -2.01
GCM1Q9NP62 RNA5SP344-201ENST00000411081 104 ntBASIC2.51□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 191 ms