Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 MIR4677-201ENST00000584153 80 ntBASIC-0.31□□□□□ -2.46
KIAA1549Q9HCM3 AC004223.4-201ENST00000612426 332 ntBASIC-0.31□□□□□ -2.46
KIAA1549Q9HCM3 Z69908.1-201ENST00000622603 247 ntBASIC-0.31□□□□□ -2.46
KIAA1549Q9HCM3 ZNF299P-201ENST00000406845 1804 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RNY4P3-201ENST00000365254 95 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MIR106A-201ENST00000384870 81 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 SNORA75.1-201ENST00000391130 148 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-847P-201ENST00000411115 108 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RPL39P34-201ENST00000477141 156 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-232P-201ENST00000517144 64 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RNU2-60P-201ENST00000517290 128 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 AC006600.1-201ENST00000572529 153 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MIR3672-201ENST00000584290 82 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MIR8055-201ENST00000610739 97 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MIR7107-201ENST00000611489 80 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 AC134878.1-201ENST00000619901 243 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MIR499B-201ENST00000636498 73 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 AC073869.9-201ENST00000641610 120 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 SNORD115-30-201ENST00000364117 82 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-702P-201ENST00000364982 107 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-38P-201ENST00000384085 107 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MT-TF-201ENST00000387314 71 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 SNORA26.8-201ENST00000391306 124 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-504P-201ENST00000516568 104 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 ZNF519P2-201ENST00000557032 169 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MIR5706-201ENST00000579841 80 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 MIR4639-201ENST00000584938 69 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 AC011921.3-201ENST00000605540 361 ntBASIC-0.32□□□□□ -2.46
KIAA1549Q9HCM3 SNORD114-28-201ENST00000363610 72 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 Y_RNA.481-201ENST00000384373 102 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 MIR873-201ENST00000401120 77 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 Y_RNA.621-201ENST00000411065 96 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-1001P-201ENST00000411265 100 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 MTND1P11-201ENST00000456661 876 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 SNORA25.10-201ENST00000515926 124 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-135P-201ENST00000516769 101 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 MIR5188-201ENST00000583467 113 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.33□□□□□ -2.46
KIAA1549Q9HCM3 Y_RNA.303-201ENST00000364998 94 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-811P-201ENST00000384069 107 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 PCNPP3-201ENST00000393579 471 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 RNU2-13P-201ENST00000515909 113 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 MIR4528-201ENST00000577763 90 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 MIR4436A-201ENST00000585278 85 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 AC124303.1-201ENST00000605703 360 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 AC092954.2-201ENST00000609103 430 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 5S_rRNA.13-201ENST00000622298 123 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 RNA5SP275-201ENST00000363936 118 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 SNORA1.1-201ENST00000364671 133 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 SNORD28-201ENST00000384706 75 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 AC096949.1-201ENST00000412047 152 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 FCF1P9-201ENST00000412546 282 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 AC244250.2-201ENST00000418731 148 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 RNU7-66P-201ENST00000459469 62 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 PRDX4P1-201ENST00000507189 574 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 RNU6-1232P-201ENST00000516299 86 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 MIR4273-201ENST00000582824 84 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 AC020891.4-201ENST00000605745 93 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 MTND1P7-201ENST00000632801 297 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 MIR3674-201ENST00000636576 68 ntBASIC-0.34□□□□□ -2.46
KIAA1549Q9HCM3 Y_RNA.125-201ENST00000363371 111 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 RNU6-509P-201ENST00000363519 107 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 Y_RNA.231-201ENST00000364358 102 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 MIR802-201ENST00000390235 94 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 MTND3P21-201ENST00000433774 331 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 POLR2KP2-201ENST00000438155 177 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 AC087499.4-201ENST00000448505 178 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 MTND1P17-201ENST00000448961 204 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 AC105029.1-201ENST00000520250 669 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 MIR4676-201ENST00000583078 72 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 AC005972.2-201ENST00000604690 348 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 AC010205.1-201ENST00000616668 449 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 MIR6863-201ENST00000636112 90 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 MIR6828-201ENST00000636181 60 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 AC068137.3-201ENST00000639191 341 ntBASIC-0.35□□□□□ -2.47
KIAA1549Q9HCM3 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.36□□□□□ -2.47
KIAA1549Q9HCM3 RNA5SP331-201ENST00000364986 107 ntBASIC-0.36□□□□□ -2.47
KIAA1549Q9HCM3 RNU6-1310P-201ENST00000384153 107 ntBASIC-0.36□□□□□ -2.47
KIAA1549Q9HCM3 SNORA72-201ENST00000384339 132 ntBASIC-0.36□□□□□ -2.47
KIAA1549Q9HCM3 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-0.36□□□□□ -2.47
KIAA1549Q9HCM3 RNU6-329P-201ENST00000459618 107 ntBASIC-0.36□□□□□ -2.47
KIAA1549Q9HCM3 SNORA40.9-201ENST00000515895 93 ntBASIC-0.36□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms