Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RNA5SP100-201ENST00000410903 110 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 RNA5SP59-201ENST00000410922 110 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 AC009310.1-201ENST00000414414 451 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 AC245047.3-201ENST00000429428 127 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.97□□□□□ -2.09
USP29Q9HBJ7 SNORD11-201ENST00000459124 84 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 AC108729.3-201ENST00000513484 108 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 AP002004.2-201ENST00000531656 154 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 AL391903.3-201ENST00000612158 163 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.97□□□□□ -2.09
USP29Q9HBJ7 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
USP29Q9HBJ7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
USP29Q9HBJ7 RNU4-41P-201ENST00000364426 143 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.253-201ENST00000364562 112 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 RN7SKP51-201ENST00000410781 304 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 RNA5SP489-201ENST00000410986 109 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 AC069257.2-201ENST00000441819 155 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 AC245047.8-201ENST00000456455 284 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 RPL23AP63-201ENST00000498752 471 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 RNA5SP437-201ENST00000517249 129 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.96□□□□□ -2.1
USP29Q9HBJ7 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.96□□□□□ -2.1
USP29Q9HBJ7 MIR6845-201ENST00000613182 61 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 MIR8054-201ENST00000620877 86 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.96□□□□□ -2.1
USP29Q9HBJ7 U6.106-201ENST00000636360 105 ntBASIC1.96□□□□□ -2.1
USP29Q9HBJ7 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.75-201ENST00000362927 97 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 RNU6-103P-201ENST00000363686 107 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.180-201ENST00000363867 113 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.412-201ENST00000384001 104 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 RNU4-70P-201ENST00000384579 139 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
USP29Q9HBJ7 RNU6-440P-201ENST00000390882 105 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.95□□□□□ -2.1
USP29Q9HBJ7 AL049830.1-201ENST00000468034 425 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 AC074198.2-201ENST00000508153 258 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 RPL23AP91-201ENST00000569211 455 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 MIR4287-201ENST00000579398 78 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 MIR4744-201ENST00000581563 82 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 MIR2681-201ENST00000581814 105 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.95□□□□□ -2.1
USP29Q9HBJ7 AC108706.1-201ENST00000611053 297 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 AL591926.4-201ENST00000616895 298 ntBASIC1.95□□□□□ -2.1
USP29Q9HBJ7 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.95□□□□□ -2.1
USP29Q9HBJ7 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
USP29Q9HBJ7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
USP29Q9HBJ7 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.94□□□□□ -2.1
USP29Q9HBJ7 RNA5SP276-201ENST00000362580 94 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 SNORA4.2-201ENST00000365313 147 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 MIR520A-201ENST00000384862 85 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 RNU6-578P-201ENST00000390980 103 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.621-201ENST00000411065 96 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 HSPE1P9-201ENST00000440046 311 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 NDUFA4P2-201ENST00000489989 244 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 HMGN1P7-201ENST00000491722 313 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.94□□□□□ -2.1
USP29Q9HBJ7 AL627230.6-201ENST00000611129 280 ntBASIC1.94□□□□□ -2.1
USP29Q9HBJ7 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.164-201ENST00000363709 102 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.182-201ENST00000363880 111 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 RNU6-209P-201ENST00000384118 107 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 RNU6-1228P-201ENST00000391014 107 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 AL606845.1-201ENST00000404881 255 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 AC244636.1-201ENST00000421152 228 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.93□□□□□ -2.1
USP29Q9HBJ7 RNU6-561P-201ENST00000516222 102 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 MRPS18CP4-201ENST00000535821 231 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 MIR4762-201ENST00000585261 75 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 AP000942.3-201ENST00000603702 160 ntBASIC1.93□□□□□ -2.1
USP29Q9HBJ7 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.93□□□□□ -2.1
USP29Q9HBJ7 Y_RNA.270-201ENST00000364693 104 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 RNU6-275P-201ENST00000364910 107 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 RNY3P5-201ENST00000384127 102 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 MIR522-201ENST00000385071 87 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 SNRPGP10-201ENST00000432323 225 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 RPL23AP6-201ENST00000446637 472 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.92□□□□□ -2.1
USP29Q9HBJ7 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.92□□□□□ -2.1
USP29Q9HBJ7 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.92□□□□□ -2.1
USP29Q9HBJ7 OR9P1P-201ENST00000496431 281 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 RNU6-1007P-201ENST00000516586 107 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 RNU2-56P-201ENST00000516826 190 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 AC109810.1-201ENST00000534066 224 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 AL049861.1-201ENST00000603130 150 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.92□□□□□ -2.1
USP29Q9HBJ7 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
USP29Q9HBJ7 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USP29Q9HBJ7 U8.5-201ENST00000364528 136 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 RNU6-312P-201ENST00000364629 107 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 RNU5E-9P-201ENST00000411164 104 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.91□□□□□ -2.1
USP29Q9HBJ7 SNRPGP8-201ENST00000454064 226 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 MRPS17P9-201ENST00000511924 393 ntBASIC1.91□□□□□ -2.1
USP29Q9HBJ7 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms