Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 Y_RNA.116-201ENST00000363292 103 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 RNU1-109P-201ENST00000383960 147 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 AL606517.2-201ENST00000442855 241 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 Z96811.1-201ENST00000445880 108 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 RNU6-240P-201ENST00000516098 97 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 RNU7-25P-201ENST00000516544 62 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 MIR6852-201ENST00000621699 66 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 SCARNA15.3-201ENST00000626315 122 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 SCARNA4.1-201ENST00000628597 123 ntBASIC2.35□□□□□ -2.03
SEC61A2Q9H9S3 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 MIR6073-201ENST00000352083 89 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 SNORD14E-201ENST00000364009 85 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 RNA5SP493-201ENST00000364115 91 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 AC099677.2-201ENST00000436385 175 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 AL031737.1-201ENST00000450125 223 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 AL109933.2-201ENST00000452651 260 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 RNU1-131P-201ENST00000458943 161 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 SNORA59A-201ENST00000459326 152 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 MIR5197-201ENST00000583721 112 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 AC087685.1-201ENST00000587507 141 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 MIR4679-1-201ENST00000637619 75 ntBASIC2.34□□□□□ -2.03
SEC61A2Q9H9S3 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 SNORA2.2-201ENST00000365473 135 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.495-201ENST00000384435 112 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 CST2P1-201ENST00000425770 87 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 AL445687.1-201ENST00000439946 251 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 RNU7-94P-201ENST00000459576 63 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 AC007012.1-201ENST00000567192 175 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 AC006023.1-201ENST00000603944 259 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 AC022202.1-201ENST00000613515 211 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 CTSLP2-204ENST00000629029 392 ntBASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-23P-201ENST00000363283 107 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.265-201ENST00000364677 108 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-442P-201ENST00000383968 104 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.549-201ENST00000384657 102 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 RNA5SP109-201ENST00000391010 116 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 SNORD45.4-201ENST00000516629 73 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 AC024995.1-201ENST00000523014 93 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 MIR4672-201ENST00000583126 81 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 AC134878.1-201ENST00000619901 243 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.32□□□□□ -2.04
SEC61A2Q9H9S3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-859P-201ENST00000362728 107 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-268P-201ENST00000364174 107 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.242-201ENST00000364473 110 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-1107P-201ENST00000364817 104 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-1189P-201ENST00000383958 107 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.547-201ENST00000384654 119 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 MIR515-2-201ENST00000384883 83 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 MIR515-1-201ENST00000384884 83 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 MIR9-1-201ENST00000385198 89 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 RNA5SP181-201ENST00000410246 98 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 RNA5SP184-201ENST00000411071 108 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 AC245047.3-201ENST00000429428 127 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-113P-201ENST00000516653 101 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 SNORD36C-201ENST00000516733 66 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 MIR3169-201ENST00000578032 83 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.31□□□□□ -2.04
SEC61A2Q9H9S3 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 snoU2-30.1-201ENST00000365012 70 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.309-201ENST00000365046 111 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-32P-201ENST00000383948 107 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-13P-201ENST00000384248 107 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-106P-201ENST00000384405 107 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-12P-201ENST00000384604 107 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-41P-201ENST00000384741 107 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 MIR570-201ENST00000384917 97 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 SNORD12C-201ENST00000386307 89 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-554P-201ENST00000410466 106 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNA5SP136-201ENST00000410906 107 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 UBE2DNL-203ENST00000474922 222 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 MIR3616-201ENST00000584070 92 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 AL049779.4-201ENST00000604500 156 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 AC006441.5-201ENST00000612680 209 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 FO624990.1-201ENST00000636373 85 ntBASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.3□□□□□ -2.04
SEC61A2Q9H9S3 Y_RNA.37-201ENST00000362606 108 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 SNORD115-28-201ENST00000363931 81 ntBASIC2.29□□□□□ -2.04
SEC61A2Q9H9S3 RNU6-690P-201ENST00000365242 106 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms