Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RN7SKP192-201ENST00000411291 327 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 SEPT7P4-201ENST00000437076 306 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 SNORD77.4-201ENST00000516158 81 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 RNU6-561P-201ENST00000516222 102 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 SCARNA16.3-201ENST00000516595 184 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 MIR4431-201ENST00000579990 94 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 MIR4762-201ENST00000585261 75 ntBASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC113Q9H0I3 SNORD45.3-201ENST00000363836 72 ntBASIC2.43□□□□□ -2.02
CCDC113Q9H0I3 U8.5-201ENST00000364528 136 ntBASIC2.43□□□□□ -2.02
CCDC113Q9H0I3 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.43□□□□□ -2.02
CCDC113Q9H0I3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC113Q9H0I3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 AC006461.1-201ENST00000412637 326 ntBASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 AC244636.1-201ENST00000421152 228 ntBASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 RNU7-12P-201ENST00000516030 62 ntBASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 RNA5SP200-201ENST00000516360 103 ntBASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 SNORD45.4-201ENST00000516629 73 ntBASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC113Q9H0I3 SNORD50B-201ENST00000364995 70 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 RNU6-1138P-201ENST00000365359 106 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 RNU6-442P-201ENST00000383968 104 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 PCNPP3-201ENST00000393579 471 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 RPS27P21-201ENST00000486977 252 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 AC005840.1-201ENST00000498412 377 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 CYCTP-201ENST00000504253 315 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 MRPS17P9-201ENST00000511924 393 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 AC107027.2-201ENST00000512197 115 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 RNA5SP168-201ENST00000516642 112 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 AC008507.4-201ENST00000585464 127 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 AC120024.3-201ENST00000603167 156 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 AC104465.1-201ENST00000611365 139 ntBASIC2.41□□□□□ -2.02
CCDC113Q9H0I3 U8.2-201ENST00000363156 134 ntBASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 RNU6-414P-201ENST00000363705 104 ntBASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 U8.16-201ENST00000391279 133 ntBASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 CALM2P4-201ENST00000430810 426 ntBASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 RNU6-365P-201ENST00000517113 106 ntBASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 AC021506.2-201ENST00000612354 169 ntBASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CCDC113Q9H0I3 RNU6-643P-201ENST00000384018 107 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.464-201ENST00000384282 110 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 MIR17-201ENST00000385012 84 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 SNORD72-201ENST00000390994 80 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 HMGN2P32-201ENST00000444648 269 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 AC114811.1-201ENST00000507207 168 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 RNA5SP153-201ENST00000516498 76 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 RNU6-1116P-201ENST00000517269 99 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 MIR4648-201ENST00000580107 72 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 AL359851.1-201ENST00000569460 4997 ntBASIC2.39□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.8-201ENST00000362353 102 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.336-201ENST00000365307 109 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.441-201ENST00000384123 112 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 RNU6-424P-201ENST00000384367 105 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.486-201ENST00000384398 107 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.521-201ENST00000384560 114 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 SNORA64-201ENST00000384674 134 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 MIR891A-201ENST00000401237 79 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 RNU4-43P-201ENST00000410628 137 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 RNU6-197P-201ENST00000516680 100 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 MIR6873-201ENST00000622788 63 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 AC027279.3-201ENST00000625055 122 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 SNORD3E-202ENST00000627253 216 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 AC092881.1-201ENST00000638218 2733 ntBASIC2.38□□□□□ -2.03
CCDC113Q9H0I3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 RNU4-84P-201ENST00000364200 139 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.272-201ENST00000364696 102 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.337-201ENST00000365312 102 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 RNU6-484P-201ENST00000384016 107 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 RNU6-239P-201ENST00000390990 99 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 AL023284.1-201ENST00000403956 276 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 MIR4299-201ENST00000577899 72 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 AL513423.1-201ENST00000621695 132 ntBASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.37□□□□□ -2.03
CCDC113Q9H0I3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 Y_RNA.634-201ENST00000364811 113 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 SNORA48.3-201ENST00000391081 134 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 RNU6-1135P-201ENST00000411083 103 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 RNU5E-9P-201ENST00000411164 104 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 AL356379.1-201ENST00000414105 126 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 PGBD4P5-201ENST00000445958 426 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 RNU6-504P-201ENST00000516568 104 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 MIR378D2-201ENST00000580636 98 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 MIR6132-201ENST00000622083 109 ntBASIC2.36□□□□□ -2.03
CCDC113Q9H0I3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 505.7 ms