Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL355297.2-201ENST00000604792 129 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 AL353149.1-201ENST00000610667 244 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 MAPK10-266ENST00000641066 6555 ntBASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.38□□□□□ -2.03
SSBP3Q9BWW4 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 SNORA1B-201ENST00000362535 133 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.37-201ENST00000362606 108 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 snoU2-30.1-201ENST00000365012 70 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 MIR1289-1-201ENST00000408836 144 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 RNU2-48P-201ENST00000410694 191 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 AC105272.1-201ENST00000438604 198 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 RNU7-80P-201ENST00000459562 61 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 AC023141.11-201ENST00000508864 202 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 AC091826.1-201ENST00000514065 313 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 RNU7-25P-201ENST00000516544 62 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 RNU6-158P-201ENST00000517104 100 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 AP003327.1-201ENST00000529684 127 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 MIR3163-201ENST00000581592 73 ntBASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSBP3Q9BWW4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 SNORA63D-201ENST00000364359 132 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.265-201ENST00000364677 108 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.454-201ENST00000384224 113 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 MIR548D2-201ENST00000384955 97 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 MTATP8P2-201ENST00000435212 202 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 RNU1-131P-201ENST00000458943 161 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 SNORA18.7-201ENST00000516910 131 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 snoMBII-202.2-201ENST00000517263 86 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 AC024995.1-201ENST00000523014 93 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 GTF3AP2-201ENST00000557014 266 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 SNORD115-40-201ENST00000606510 82 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 U6.108-201ENST00000637764 58 ntBASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
SSBP3Q9BWW4 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 SNORA68.1-201ENST00000364537 132 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.351-201ENST00000365436 96 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.547-201ENST00000384654 119 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 MIR512-1-201ENST00000384913 84 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 AL445646.1-201ENST00000431784 216 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 RPL39P25-201ENST00000449384 154 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 ATP5J2P3-201ENST00000451550 258 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 RN7SL636P-201ENST00000497504 294 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 RNU6-667P-201ENST00000517186 102 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 MIR4762-201ENST00000585261 75 ntBASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
SSBP3Q9BWW4 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 MIR302B-201ENST00000362188 73 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.93-201ENST00000363066 109 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 RNU6-268P-201ENST00000364174 107 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 RNA5SP173-201ENST00000364857 136 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.336-201ENST00000365307 109 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.344-201ENST00000365381 112 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 Y_RNA.440-201ENST00000384120 114 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 RNU6-820P-201ENST00000384273 107 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 RNY1P7-201ENST00000384743 110 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 MT-TI-201ENST00000387365 69 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 SNORA19.1-201ENST00000410656 129 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 SRIP3-201ENST00000413200 219 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 RNU6-904P-201ENST00000516206 101 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 SNORD36C-201ENST00000516733 66 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 AP003484.1-201ENST00000530974 250 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 MIR4305-201ENST00000583252 102 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 AL033523.1-201ENST00000605153 153 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 AC062037.1-201ENST00000605302 128 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 MIR6733-201ENST00000635723 61 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 AL162726.3-218ENST00000636401 95 ntBASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
SSBP3Q9BWW4 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 Y_RNA.99-201ENST00000363138 105 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 RNU4-36P-201ENST00000364294 144 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 U8.5-201ENST00000364528 136 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 MIR450A2-201ENST00000385022 100 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 MIR1912-201ENST00000410389 80 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 AC087499.4-201ENST00000448505 178 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 AL163195.1-201ENST00000496941 348 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 RNU7-123P-201ENST00000515911 60 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 RNA5SP356-201ENST00000515972 94 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 SNORD45.4-201ENST00000516629 73 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 MIR3683-201ENST00000580847 82 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 MALAT1.1-201ENST00000618249 95 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 CTSLP2-204ENST00000629029 392 ntBASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
SSBP3Q9BWW4 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 Y_RNA.107-201ENST00000363190 121 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.32□□□□□ -2.04
SSBP3Q9BWW4 SNORA80E-201ENST00000384744 137 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms