Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 MLLT10P1-201ENST00000418346 262 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 snoU13.26-201ENST00000459452 105 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 AL049830.1-201ENST00000468034 425 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 MRPS17P9-201ENST00000511924 393 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 RNU6-126P-201ENST00000516685 103 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 SNORA31.15-201ENST00000516771 132 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 RNU6-365P-201ENST00000517113 106 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 AC046143.2-201ENST00000609789 160 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 AC022513.1-201ENST00000624512 117 ntBASIC2.26□□□□□ -2.05
NDC1Q9BTX1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 MIR126-201ENST00000362291 85 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 MIR597-201ENST00000384968 97 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 SNORD72-201ENST00000390994 80 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 HMGN2P39-201ENST00000398005 273 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 RNA5SP425-201ENST00000410336 112 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 RN7SKP192-201ENST00000411291 327 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 UBL5P3-201ENST00000475112 231 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 RNU4-57P-201ENST00000515980 135 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 RNA5SP402-201ENST00000517148 110 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 AP002004.2-201ENST00000531656 154 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 AC069114.2-201ENST00000604699 304 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 AC016717.2-201ENST00000609089 5141 ntBASIC2.25□□□□□ -2.05
NDC1Q9BTX1 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
NDC1Q9BTX1 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
NDC1Q9BTX1 U8.1-201ENST00000362843 134 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 Y_RNA.294-201ENST00000364916 102 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 MIR1283-2-201ENST00000408621 87 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.24□□□□□ -2.05
NDC1Q9BTX1 RNA5SP281-201ENST00000516504 135 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 Y_RNA.686-201ENST00000516548 134 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 AC007751.1-201ENST00000529260 376 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 AC131055.1-201ENST00000584626 316 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 AC008507.4-201ENST00000585464 127 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 SNORD14A-201ENST00000606526 91 ntBASIC2.24□□□□□ -2.05
NDC1Q9BTX1 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
NDC1Q9BTX1 RNU6-1019P-201ENST00000364424 107 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 SNORD50B-201ENST00000364995 70 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 MIR522-201ENST00000385071 87 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 Y_RNA.629-201ENST00000411368 105 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 HMGN2P3-201ENST00000433603 273 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 HMGN2P5-201ENST00000436882 273 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 AL606517.2-201ENST00000442855 241 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 RNU6-504P-201ENST00000516568 104 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 AL359881.1-201ENST00000602916 267 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 AC022217.4-201ENST00000604389 163 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 AC067747.1-201ENST00000608026 250 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 AL137847.3-201ENST00000611521 109 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 MIR7843-201ENST00000622274 79 ntBASIC2.23□□□□□ -2.05
NDC1Q9BTX1 Y_RNA.120-201ENST00000363304 110 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 RNU1-52P-201ENST00000384190 164 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 AC007064.1-201ENST00000412238 351 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.22□□□□□ -2.05
NDC1Q9BTX1 AL356320.1-201ENST00000429616 163 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 FTH1P12-201ENST00000432137 551 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 AC069257.2-201ENST00000441819 155 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.22□□□□□ -2.05
NDC1Q9BTX1 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.22□□□□□ -2.05
NDC1Q9BTX1 Y_RNA.714-201ENST00000517065 90 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 MIR5094-201ENST00000578766 85 ntBASIC2.22□□□□□ -2.05
NDC1Q9BTX1 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.22□□□□□ -2.05
NDC1Q9BTX1 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.22□□□□□ -2.05
NDC1Q9BTX1 SNORD68-201ENST00000363214 84 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 SNORA1-201ENST00000384107 130 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 SNORD61-201ENST00000384252 73 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 MIR504-201ENST00000385065 83 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.21□□□□□ -2.06
NDC1Q9BTX1 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC2.21□□□□□ -2.06
NDC1Q9BTX1 RNU7-107P-201ENST00000459121 61 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.666-201ENST00000516187 112 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 SNORA18.4-201ENST00000516440 124 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 RNU6-659P-201ENST00000516454 104 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 RNU1-104P-201ENST00000517280 175 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 AC084364.2-201ENST00000546924 395 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 AL365205.2-201ENST00000594586 68 ntBASIC2.21□□□□□ -2.06
NDC1Q9BTX1 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
NDC1Q9BTX1 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.525-201ENST00000384570 113 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 MIR624-201ENST00000385217 97 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
NDC1Q9BTX1 RN7SKP223-201ENST00000410582 62 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 RNA5SP127-201ENST00000411051 133 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 AC245047.3-201ENST00000429428 127 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.692-201ENST00000516627 105 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 RNU6-1270P-201ENST00000517128 108 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 RNU2-60P-201ENST00000517290 128 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 Y_RNA.757-201ENST00000578934 114 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 MIR3129-201ENST00000581095 76 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 AC087685.1-201ENST00000587507 141 ntBASIC2.2□□□□□ -2.06
NDC1Q9BTX1 MIR6873-201ENST00000622788 63 ntBASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 550.5 ms