Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 AL031274.2-201ENST00000599419 203 ntBASIC2.2□□□□□ -2.06
ZSWIM1Q9BR11 AC022217.4-201ENST00000604389 163 ntBASIC2.2□□□□□ -2.06
ZSWIM1Q9BR11 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.2□□□□□ -2.06
ZSWIM1Q9BR11 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.2□□□□□ -2.06
ZSWIM1Q9BR11 AC091895.1-201ENST00000624494 256 ntBASIC2.2□□□□□ -2.06
ZSWIM1Q9BR11 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ZSWIM1Q9BR11 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.91-201ENST00000363042 107 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.267-201ENST00000364679 109 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 SNORA67.1-201ENST00000364749 141 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 RNA5SP138-201ENST00000365098 114 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 SNORA40-201ENST00000388090 126 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 SNORD37.2-201ENST00000391075 66 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 MIR1283-2-201ENST00000408621 87 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.621-201ENST00000411065 96 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 BX510359.4-201ENST00000423750 193 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 SNRPGP10-201ENST00000432323 225 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 AC245047.4-201ENST00000433189 144 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 AC233266.1-201ENST00000454518 96 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 RNU1-40P-201ENST00000516816 164 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 RNU1-97P-201ENST00000516872 164 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 AC121758.2-201ENST00000553271 193 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 MIR4762-201ENST00000585261 75 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 AC008507.4-201ENST00000585464 127 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 SNRPGP19-201ENST00000603826 189 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 AC242852.1-201ENST00000612151 96 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.783-201ENST00000613546 102 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 AC244015.1-201ENST00000622301 99 ntBASIC2.19□□□□□ -2.06
ZSWIM1Q9BR11 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.66-201ENST00000362862 102 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 U8.5-201ENST00000364528 136 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 RNU6-1117P-201ENST00000384525 104 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 RNU2-70P-201ENST00000410718 179 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 MTND4LP9-201ENST00000427694 174 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 RNA5SP272-201ENST00000516095 111 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 AC002984.1-201ENST00000591692 448 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 Pinc.1-201ENST00000616452 154 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 AL591926.4-201ENST00000616895 298 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 MIR7843-201ENST00000622274 79 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 AP001340.1-201ENST00000624405 217 ntBASIC2.18□□□□□ -2.06
ZSWIM1Q9BR11 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 SNORD115-3-201ENST00000363100 82 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 RNU6-1019P-201ENST00000364424 107 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.242-201ENST00000364473 110 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 RNU6-1082P-201ENST00000364574 107 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.420-201ENST00000384043 110 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 SNORA70B-201ENST00000384210 135 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 Y_RNA.486-201ENST00000384398 107 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 MIR504-201ENST00000385065 83 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 MIR522-201ENST00000385071 87 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 RNA5SP465-201ENST00000391195 109 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 AL445646.1-201ENST00000431784 216 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 FTH1P12-201ENST00000432137 551 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 AL606517.2-201ENST00000442855 241 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 AL049830.1-201ENST00000468034 425 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 MRPS17P9-201ENST00000511924 393 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 MIR5089-201ENST00000580047 84 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 AC069114.2-201ENST00000604699 304 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 MIR219B-201ENST00000637023 88 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 AP006437.1-201ENST00000641440 3685 ntBASIC2.17□□□□□ -2.06
ZSWIM1Q9BR11 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 MIR126-201ENST00000362291 85 ntBASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 SNORA25.7-201ENST00000364375 127 ntBASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 RNU6-1081P-201ENST00000384537 107 ntBASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 MIR518A2-201ENST00000384966 87 ntBASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 RNU6-588P-201ENST00000410281 105 ntBASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 RNU6-479P-201ENST00000516348 105 ntBASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
ZSWIM1Q9BR11 RNY1P11-201ENST00000363759 113 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-22P-201ENST00000384355 107 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 HMGN2P39-201ENST00000398005 273 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 RNU7-28P-201ENST00000516759 62 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 RNU2-56P-201ENST00000516826 190 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 Y_RNA.714-201ENST00000517065 90 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 RNU6-365P-201ENST00000517113 106 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 MIR4648-201ENST00000580107 72 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 MIR4524B-201ENST00000581569 115 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 AL365205.2-201ENST00000594586 68 ntBASIC2.15□□□□□ -2.07
ZSWIM1Q9BR11 AC131280.1-202ENST00000624067 4211 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 SNORD24-201ENST00000383884 75 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 RNU1-52P-201ENST00000384190 164 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 SNORA12.1-201ENST00000390873 148 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 RNA5SP482-201ENST00000391269 118 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 AC245047.3-201ENST00000429428 127 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 AC069257.2-201ENST00000441819 155 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 AC007751.1-201ENST00000529260 376 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 AC084364.2-201ENST00000546924 395 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 MIR5694-201ENST00000581190 76 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 MIR6895-201ENST00000613497 78 ntBASIC2.14□□□□□ -2.07
ZSWIM1Q9BR11 TUG1_4.1-201ENST00000619464 181 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 253.7 ms