Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 HSPE1P19-201ENST00000603327 295 ntBASIC0.9□□□□□ -2.27
CDX2Q99626 AL162730.1-201ENST00000605734 292 ntBASIC0.9□□□□□ -2.27
CDX2Q99626 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.9□□□□□ -2.27
CDX2Q99626 AL359075.3-201ENST00000613288 217 ntBASIC0.9□□□□□ -2.27
CDX2Q99626 MIR6835-201ENST00000621552 64 ntBASIC0.9□□□□□ -2.27
CDX2Q99626 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
CDX2Q99626 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CDX2Q99626 RNA5SP327-201ENST00000362494 101 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 Y_RNA.84-201ENST00000363011 104 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 RNU6-1048P-201ENST00000364054 107 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 Y_RNA.418-201ENST00000384029 102 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 Y_RNA.498-201ENST00000384460 102 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 RNU6-1065P-201ENST00000384513 106 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.89□□□□□ -2.27
CDX2Q99626 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.89□□□□□ -2.27
CDX2Q99626 RPS29P28-201ENST00000446439 141 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 MRPS10P1-201ENST00000448483 130 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 RNU7-34P-201ENST00000459394 64 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 AL133373.1-201ENST00000497098 94 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 RNU6-63P-201ENST00000516690 95 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 RNU6-1198P-201ENST00000516904 67 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 AC022616.4-201ENST00000522985 181 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.89□□□□□ -2.27
CDX2Q99626 DEFB117-201ENST00000602356 141 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 FAM71BP1-201ENST00000604431 523 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 AC096720.1-201ENST00000604441 183 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 AP001282.2-201ENST00000616149 309 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 AC010205.1-201ENST00000616668 449 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 U6.73-201ENST00000619194 103 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 MIR8054-201ENST00000620877 86 ntBASIC0.89□□□□□ -2.27
CDX2Q99626 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
CDX2Q99626 SNORD113-8-201ENST00000363497 74 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 Y_RNA.183-201ENST00000363882 113 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RNU6-1175P-201ENST00000365200 107 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 Y_RNA.477-201ENST00000384352 108 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RNU6-136P-201ENST00000384663 107 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 Y_RNA.570-201ENST00000384750 101 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
CDX2Q99626 SNORD78.2-201ENST00000391076 69 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RNU2-14P-201ENST00000411053 191 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.88□□□□□ -2.27
CDX2Q99626 SNX2P2-201ENST00000424553 323 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 MTCYBP9-201ENST00000431021 303 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RPL39P38-201ENST00000467018 153 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RNU6-496P-201ENST00000516145 99 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RNU6-436P-201ENST00000516171 114 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RNU6-911P-201ENST00000516523 104 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 SCARNA24.2-201ENST00000516968 130 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RNU2-12P-201ENST00000517216 168 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC0.88□□□□□ -2.27
CDX2Q99626 AP003733.2-201ENST00000529409 171 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 AC012433.1-201ENST00000588916 398 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 RPS29P30-201ENST00000600975 111 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 AL355297.3-201ENST00000604082 446 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 AL121655.1-201ENST00000605811 308 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.88□□□□□ -2.27
CDX2Q99626 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 U6.115-201ENST00000636045 103 ntBASIC0.88□□□□□ -2.27
CDX2Q99626 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
CDX2Q99626 Y_RNA.144-201ENST00000363521 113 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 SNORD115-30-201ENST00000364117 82 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 RNU6-280P-201ENST00000364145 104 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 Y_RNA.237-201ENST00000364439 102 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 Y_RNA.329-201ENST00000365209 107 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 Y_RNA.422-201ENST00000384054 114 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 Y_RNA.439-201ENST00000384119 94 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 SNORA20B-201ENST00000384220 132 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 RNU6-950P-201ENST00000384651 107 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 MIR1253-201ENST00000408273 105 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 RNU6-1203P-201ENST00000410703 110 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 RNU2-38P-201ENST00000410856 79 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 MTCO3P19-201ENST00000415864 321 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 AC010154.1-201ENST00000425857 269 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 SNORD65B-201ENST00000459126 73 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 MTCO2P24-201ENST00000515611 426 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 SNORD116-28-201ENST00000516123 91 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 RNU1-142P-201ENST00000516682 145 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC0.87□□□□□ -2.27
CDX2Q99626 AC023157.2-201ENST00000540596 141 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 AL442663.2-201ENST00000554385 511 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 AL512605.2-201ENST00000592972 256 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 AC022441.3-201ENST00000605737 136 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 MIR376A1-201ENST00000616574 68 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 MIR8062-201ENST00000621515 85 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 AC027335.2-201ENST00000624030 375 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 MIR3674-201ENST00000636576 68 ntBASIC0.87□□□□□ -2.27
CDX2Q99626 RNU4-80P-201ENST00000363200 141 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 Y_RNA.117-201ENST00000363294 101 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 RNU4-50P-201ENST00000364361 141 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 SNORA63.7-201ENST00000365579 123 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 Y_RNA.380-201ENST00000365663 111 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 SNORD116-13-201ENST00000384408 92 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 U8.19-201ENST00000459095 133 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 RNU7-99P-201ENST00000516271 62 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 RNU6-155P-201ENST00000516347 100 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 RNU7-110P-201ENST00000516891 62 ntBASIC0.86□□□□□ -2.27
CDX2Q99626 Y_RNA.713-201ENST00000517013 96 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms