Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AC245047.4-201ENST00000433189 144 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 AC069257.2-201ENST00000441819 155 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 AL392103.1-201ENST00000447000 198 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 snoU13.26-201ENST00000459452 105 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 AC025033.1-201ENST00000463883 194 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 NDUFA4P2-201ENST00000489989 244 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 SNORD77.4-201ENST00000516158 81 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 RNU6-1299P-201ENST00000516316 100 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 RNU7-149P-201ENST00000516739 59 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 U1.36-201ENST00000620684 176 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 MIR6873-201ENST00000622788 63 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SNX18Q96RF0 ZNF702P-202ENST00000434269 1966 ntBASIC1.99□□□□□ -2.09
SNX18Q96RF0 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNX18Q96RF0 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SNX18Q96RF0 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
SNX18Q96RF0 Y_RNA.400-201ENST00000383963 111 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 RNU6-484P-201ENST00000384016 107 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 Y_RNA.521-201ENST00000384560 114 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 SNORD23.1-201ENST00000408212 104 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 RN7SKP223-201ENST00000410582 62 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX18Q96RF0 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX18Q96RF0 AL356320.1-201ENST00000429616 163 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.98□□□□□ -2.09
SNX18Q96RF0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.98□□□□□ -2.09
SNX18Q96RF0 Pinc.1-201ENST00000616452 154 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 MIR6132-201ENST00000622083 109 ntBASIC1.98□□□□□ -2.09
SNX18Q96RF0 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNX18Q96RF0 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNX18Q96RF0 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNX18Q96RF0 SNORD68-201ENST00000363214 84 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 RNU4-11P-201ENST00000365287 132 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 RNU2-70P-201ENST00000410718 179 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 RNU2-55P-201ENST00000411146 174 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNX18Q96RF0 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.97□□□□□ -2.09
SNX18Q96RF0 OR9P1P-201ENST00000496431 281 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 RNU6-237P-201ENST00000515985 71 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 RNU6-197P-201ENST00000516680 100 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 RNU2-19P-201ENST00000517288 84 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 SUB1P4-201ENST00000566062 339 ntBASIC1.97□□□□□ -2.09
SNX18Q96RF0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.97□□□□□ -2.09
SNX18Q96RF0 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SNX18Q96RF0 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
SNX18Q96RF0 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.09
SNX18Q96RF0 Y_RNA.91-201ENST00000363042 107 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 Y_RNA.215-201ENST00000364204 112 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 Y_RNA.265-201ENST00000364677 108 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 Y_RNA.488-201ENST00000384403 102 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 RNU6-768P-201ENST00000384683 107 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 MIR522-201ENST00000385071 87 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 SNORD72-201ENST00000390994 80 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 SNORD37.2-201ENST00000391075 66 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 RNU6-131P-201ENST00000391144 107 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 RNU2-7P-201ENST00000410794 178 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 AL356379.1-201ENST00000414105 126 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 AL021397.1-201ENST00000451806 248 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 AC055731.1-201ENST00000474387 401 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX18Q96RF0 MRPS17P9-201ENST00000511924 393 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX18Q96RF0 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.96□□□□□ -2.1
SNX18Q96RF0 MIR4648-201ENST00000580107 72 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 MIR378D2-201ENST00000580636 98 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 MIR3910-1-201ENST00000580936 111 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 AC078899.2-201ENST00000595282 212 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 MIR8054-201ENST00000620877 86 ntBASIC1.96□□□□□ -2.1
SNX18Q96RF0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.96□□□□□ -2.1
SNX18Q96RF0 MIR520A-201ENST00000384862 85 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 MIR221-201ENST00000385135 110 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 RNU6-440P-201ENST00000390882 105 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 SUMO2P12-201ENST00000405924 140 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 CYCSP49-201ENST00000420810 319 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 STAG3L5P-204ENST00000443759 179 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX18Q96RF0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.95□□□□□ -2.1
SNX18Q96RF0 MIR1273D-201ENST00000577266 86 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 MIR7843-201ENST00000622274 79 ntBASIC1.95□□□□□ -2.1
SNX18Q96RF0 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
SNX18Q96RF0 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.94□□□□□ -2.1
SNX18Q96RF0 RNU6-199P-201ENST00000362954 107 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 RNU6-112P-201ENST00000363599 104 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 SNORA63D-201ENST00000364359 132 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 Y_RNA.634-201ENST00000364811 113 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 RNU6-1138P-201ENST00000365359 106 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 Y_RNA.486-201ENST00000384398 107 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 MIR613-201ENST00000385248 95 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SNX18Q96RF0 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.94□□□□□ -2.1
SNX18Q96RF0 HSPE1P9-201ENST00000440046 311 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 RNA5SP272-201ENST00000516095 111 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 SNORA25.12-201ENST00000516202 82 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 SNORA31.10-201ENST00000516482 106 ntBASIC1.94□□□□□ -2.1
SNX18Q96RF0 SCARNA16.3-201ENST00000516595 184 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms