Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-1291P-201ENST00000516591 104 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 RNU6-1096P-201ENST00000517089 102 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 AC024995.1-201ENST00000523014 93 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 POLR3GP1-201ENST00000594073 261 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 AC004792.1-201ENST00000614523 137 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 FTX_2.1-201ENST00000618816 94 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 MIR6079-201ENST00000635807 62 ntBASIC1.26□□□□□ -2.21
ZIM3Q96PE6 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.796-201ENST00000364268 102 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.799-201ENST00000364992 102 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.308-201ENST00000365043 101 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 RNU6-1080P-201ENST00000383982 107 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.435-201ENST00000384095 112 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 SNORA72-201ENST00000384339 132 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 MIR526A2-201ENST00000390198 65 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 COX6CP10-201ENST00000416832 224 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 RPL30P13-201ENST00000418873 348 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.644-201ENST00000459006 113 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 SNORD11-201ENST00000459124 84 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 RNU7-120P-201ENST00000459334 63 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 NDUFA4P2-201ENST00000489989 244 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 AC099513.1-201ENST00000490423 301 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 AC074198.2-201ENST00000508153 258 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.25□□□□□ -2.21
ZIM3Q96PE6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.25□□□□□ -2.21
ZIM3Q96PE6 RNU6-1146P-201ENST00000516282 102 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.674-201ENST00000516362 113 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 RNU6-341P-201ENST00000516973 96 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 SNORA81.3-201ENST00000517283 198 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 AC011604.1-201ENST00000545978 196 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 MIR3945-201ENST00000581853 98 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 MIR3668-201ENST00000582138 75 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.25□□□□□ -2.21
ZIM3Q96PE6 AL442644.1-201ENST00000454390 3105 ntBASIC1.25□□□□□ -2.21
ZIM3Q96PE6 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 MIRLET7C-201ENST00000362160 84 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.229-201ENST00000364347 113 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.515-201ENST00000384535 112 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 MT-TT-201ENST00000387460 66 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 MIR1253-201ENST00000408273 105 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 RNU5E-9P-201ENST00000411164 104 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 AC024067.1-201ENST00000426199 223 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 Z98949.2-201ENST00000440996 144 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 RNU6-1278P-201ENST00000516130 107 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 RNU6-1219P-201ENST00000516143 112 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 RNU6-561P-201ENST00000516222 102 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.679-201ENST00000516416 91 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.700-201ENST00000516806 100 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 MIR3660-201ENST00000584845 100 ntBASIC1.24□□□□□ -2.21
ZIM3Q96PE6 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
ZIM3Q96PE6 ZNF209P-201ENST00000593450 2304 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.24-201ENST00000362508 103 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 RNU6-1019P-201ENST00000364424 107 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.253-201ENST00000364562 112 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 RNU6-376P-201ENST00000384731 106 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 MIR562-201ENST00000384894 95 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 RNU6-437P-201ENST00000459408 95 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 AL049830.1-201ENST00000468034 425 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 OR9P1P-201ENST00000496431 281 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 Z83818.1-201ENST00000603584 150 ntBASIC1.23□□□□□ -2.21
ZIM3Q96PE6 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.23□□□□□ -2.21
ZIM3Q96PE6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.29-201ENST00000362570 113 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.150-201ENST00000363562 102 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 RNU6-1205P-201ENST00000363625 106 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.203-201ENST00000364106 102 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.233-201ENST00000364407 101 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.262-201ENST00000364641 102 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.412-201ENST00000384001 104 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 RNU6-939P-201ENST00000384634 107 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 Y_RNA.571-201ENST00000384753 98 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 MIR515-2-201ENST00000384883 83 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 MIR515-1-201ENST00000384884 83 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 SNRPGP10-201ENST00000432323 225 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 MTND5P15-201ENST00000434246 349 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.22□□□□□ -2.21
ZIM3Q96PE6 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.22□□□□□ -2.21
ZIM3Q96PE6 AC245047.8-201ENST00000456455 284 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 RPL23AP54-201ENST00000495129 419 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 RNU1-142P-201ENST00000516682 145 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 RNU6-861P-201ENST00000516745 106 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 RNU7-116P-201ENST00000516940 62 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 SNORA31.17-201ENST00000516953 127 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 AC069114.2-201ENST00000604699 304 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 AL591926.4-201ENST00000616895 298 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 MIR8054-201ENST00000620877 86 ntBASIC1.22□□□□□ -2.21
ZIM3Q96PE6 RNU6-1209P-201ENST00000363655 107 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 RNU4-41P-201ENST00000364426 143 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 Y_RNA.240-201ENST00000364469 95 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 RNU4-17P-201ENST00000365598 141 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 RNU6-144P-201ENST00000383951 107 ntBASIC1.21□□□□□ -2.22
ZIM3Q96PE6 RNU6-484P-201ENST00000384016 107 ntBASIC1.21□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 324.1 ms