Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 RNU1-101P-201ENST00000391171 127 ntBASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 RNU6ATAC42P-201ENST00000408637 95 ntBASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 AC016397.1-201ENST00000412463 242 ntBASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 AC003685.2-201ENST00000422795 395 ntBASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 RPS27P16-201ENST00000425758 201 ntBASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 AC011998.1-201ENST00000433403 117 ntBASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
MS4A3Q96HJ5 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
MS4A3Q96HJ5 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
MS4A3Q96HJ5 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
MS4A3Q96HJ5 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
MS4A3Q96HJ5 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 MIR331-201ENST00000362302 94 ntBASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 RNA5SP139-201ENST00000364340 117 ntBASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 SNORA68.1-201ENST00000364537 132 ntBASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 RNU7-106P-201ENST00000459514 67 ntBASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
MS4A3Q96HJ5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 SNORA67.4-201ENST00000384688 142 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 MIR141-201ENST00000384975 95 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 RN7SL481P-201ENST00000477764 299 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 AC091167.1-201ENST00000492017 396 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 AC023632.4-201ENST00000517783 191 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 AC079587.1-201ENST00000603846 277 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 AC006023.1-201ENST00000603944 259 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 U4.3-201ENST00000621047 82 ntBASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
MS4A3Q96HJ5 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 MIR3074-201ENST00000384885 81 ntBASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 RPS29P17-201ENST00000430795 166 ntBASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 RN7SL98P-201ENST00000462271 300 ntBASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 RNU6-1194P-201ENST00000516208 104 ntBASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 RNU2-19P-201ENST00000517288 84 ntBASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 MIR378J-201ENST00000611988 109 ntBASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
MS4A3Q96HJ5 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 RNA5SP443-201ENST00000363083 132 ntBASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 RNA5SP509-201ENST00000364577 119 ntBASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 snoU13.2-201ENST00000459201 104 ntBASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 RN7SL810P-201ENST00000493031 276 ntBASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 AC113403.1-201ENST00000604910 193 ntBASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 MIR6758-201ENST00000620653 63 ntBASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
MS4A3Q96HJ5 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 SNORA24B-201ENST00000384176 131 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 SNORD63B-201ENST00000411005 70 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 SNORA74C-2-201ENST00000411179 201 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 SCARNA16.3-201ENST00000516595 184 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 MIR4284-201ENST00000578924 81 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 MIR5089-201ENST00000580047 84 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 MIR466-201ENST00000580653 84 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 MIR3935-201ENST00000583472 104 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 AC020914.4-201ENST00000597690 277 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 MIR432-201ENST00000606207 94 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 LINC02471-203ENST00000641941 4752 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 AC010300.1-201ENST00000600671 5134 ntBASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
MS4A3Q96HJ5 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 RNU6-940P-201ENST00000363433 104 ntBASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 MIR2114-201ENST00000516645 80 ntBASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 MIR5094-201ENST00000578766 85 ntBASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 MIR3140-201ENST00000583685 90 ntBASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 SNORA4-201ENST00000584302 138 ntBASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
MS4A3Q96HJ5 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
MS4A3Q96HJ5 RNU6-369P-201ENST00000362515 102 ntBASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms