Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC97Q96F63 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC97Q96F63 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
CCDC97Q96F63 RNU6-915P-201ENST00000364943 103 ntBASIC3.03□□□□□ -1.92
CCDC97Q96F63 Y_RNA.547-201ENST00000384654 119 ntBASIC3.03□□□□□ -1.92
CCDC97Q96F63 RNU6-360P-201ENST00000390944 104 ntBASIC3.03□□□□□ -1.92
CCDC97Q96F63 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC97Q96F63 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC97Q96F63 MIR3162-201ENST00000581818 82 ntBASIC3.03□□□□□ -1.92
CCDC97Q96F63 AC104984.5-201ENST00000586878 94 ntBASIC3.03□□□□□ -1.92
CCDC97Q96F63 TUG1_4.1-201ENST00000619464 181 ntBASIC3.03□□□□□ -1.92
CCDC97Q96F63 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC3.03□□□□□ -1.92
CCDC97Q96F63 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CCDC97Q96F63 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.03□□□□□ -1.93
CCDC97Q96F63 AL136360.1-201ENST00000503377 1900 ntBASIC3.02□□□□□ -1.93
CCDC97Q96F63 PGBD4P5-201ENST00000445958 426 ntBASIC3.02□□□□□ -1.93
CCDC97Q96F63 AC134878.1-201ENST00000619901 243 ntBASIC3.02□□□□□ -1.93
CCDC97Q96F63 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CCDC97Q96F63 Y_RNA.52-201ENST00000362760 96 ntBASIC3.01□□□□□ -1.93
CCDC97Q96F63 SNORD115-28-201ENST00000363931 81 ntBASIC3.01□□□□□ -1.93
CCDC97Q96F63 RNU6-959P-201ENST00000384671 107 ntBASIC3.01□□□□□ -1.93
CCDC97Q96F63 SNORD15B-201ENST00000384714 146 ntBASIC3.01□□□□□ -1.93
CCDC97Q96F63 MIR660-201ENST00000385235 97 ntBASIC3.01□□□□□ -1.93
CCDC97Q96F63 SNORD77.3-201ENST00000391113 65 ntBASIC3.01□□□□□ -1.93
CCDC97Q96F63 AF228730.3-201ENST00000436691 102 ntBASIC3.01□□□□□ -1.93
CCDC97Q96F63 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.01□□□□□ -1.93
CCDC97Q96F63 U8.1-201ENST00000362843 134 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 Y_RNA.120-201ENST00000363304 110 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 RNA5SP212-201ENST00000391223 107 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 AL445646.1-201ENST00000431784 216 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3□□□□□ -1.93
CCDC97Q96F63 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC3□□□□□ -1.93
CCDC97Q96F63 U7.2-201ENST00000607576 63 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 AC011603.4-201ENST00000611325 277 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 SNORD3E-202ENST00000627253 216 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 AC008555.8-201ENST00000623602 2168 ntBASIC3□□□□□ -1.93
CCDC97Q96F63 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC97Q96F63 MIR22-201ENST00000362190 85 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 MIR424-201ENST00000362227 98 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 RNA5SP126-201ENST00000365092 109 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 MIR539-201ENST00000365690 78 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 SNORA46-201ENST00000384762 135 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 AC015922.2-201ENST00000435593 184 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 AC093850.1-201ENST00000454121 251 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 RNA5SP356-201ENST00000515972 94 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 RNU6-971P-201ENST00000516920 106 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 AC107016.2-201ENST00000547968 190 ntBASIC2.99□□□□□ -1.93
CCDC97Q96F63 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
CCDC97Q96F63 MIR449A-201ENST00000362113 91 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 SNORD18B-201ENST00000365659 72 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 Y_RNA.410-201ENST00000383992 113 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 RNU6-1117P-201ENST00000384525 104 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 MIR452-201ENST00000385020 85 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 RNA5SP274-201ENST00000410484 108 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 EEF1A1P41-201ENST00000414667 207 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 RNU6-1211P-201ENST00000459179 105 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 Y_RNA.686-201ENST00000516548 134 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 MIR4778-201ENST00000577635 80 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 MIR4287-201ENST00000579398 78 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 MIR4435-1-201ENST00000582552 80 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 AL033523.1-201ENST00000605153 153 ntBASIC2.98□□□□□ -1.93
CCDC97Q96F63 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC97Q96F63 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC97Q96F63 Y_RNA.37-201ENST00000362606 108 ntBASIC2.97□□□□□ -1.93
CCDC97Q96F63 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.97□□□□□ -1.93
CCDC97Q96F63 GTF3AP2-201ENST00000557014 266 ntBASIC2.97□□□□□ -1.93
CCDC97Q96F63 MIR5197-201ENST00000583721 112 ntBASIC2.97□□□□□ -1.93
CCDC97Q96F63 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC97Q96F63 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CCDC97Q96F63 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
CCDC97Q96F63 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
CCDC97Q96F63 SNORA25.6-201ENST00000364121 118 ntBASIC2.96□□□□□ -1.94
CCDC97Q96F63 RNU6-1189P-201ENST00000383958 107 ntBASIC2.96□□□□□ -1.94
CCDC97Q96F63 RNU6-851P-201ENST00000384565 107 ntBASIC2.96□□□□□ -1.94
CCDC97Q96F63 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC97Q96F63 RNA5SP82-201ENST00000516707 92 ntBASIC2.96□□□□□ -1.94
CCDC97Q96F63 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.96□□□□□ -1.94
CCDC97Q96F63 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.96□□□□□ -1.94
CCDC97Q96F63 MTND5P32-201ENST00000560711 1802 ntBASIC2.96□□□□□ -1.94
CCDC97Q96F63 RNA5SP184-201ENST00000411071 108 ntBASIC2.95□□□□□ -1.94
CCDC97Q96F63 AC244636.1-201ENST00000421152 228 ntBASIC2.95□□□□□ -1.94
CCDC97Q96F63 RN7SKP43-201ENST00000516173 320 ntBASIC2.95□□□□□ -1.94
CCDC97Q96F63 RNU6-830P-201ENST00000516353 107 ntBASIC2.95□□□□□ -1.94
CCDC97Q96F63 RNU2-60P-201ENST00000517290 128 ntBASIC2.95□□□□□ -1.94
CCDC97Q96F63 AL773524.1-201ENST00000614065 229 ntBASIC2.95□□□□□ -1.94
CCDC97Q96F63 MIR203B-201ENST00000636080 86 ntBASIC2.95□□□□□ -1.94
CCDC97Q96F63 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
CCDC97Q96F63 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
CCDC97Q96F63 RNU6-1123P-201ENST00000362347 106 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 SNORA6-201ENST00000384033 151 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 MIR516B2-201ENST00000385190 85 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 SNORD88.1-201ENST00000408684 91 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 AC087499.4-201ENST00000448505 178 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 UQCRHP3-201ENST00000451503 251 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 Y_RNA.692-201ENST00000516627 105 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 Y_RNA.757-201ENST00000578934 114 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 MIR3945-201ENST00000581853 98 ntBASIC2.94□□□□□ -1.94
CCDC97Q96F63 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms